RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 KCTD5Q9NXV2 234 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 HACD3Q9P035 362 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.44□□□□□ -1.7
CD55-208ENST00000476590 MOSPD1Q9UJG1 213 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 CFL2Q9Y281 166 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 TDRKHQ9Y2W6 561 aaKnown RBP4.44□□□□□ -1.7
CD55-208ENST00000476590 NFE2L3Q9Y4A8 694 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 TMEM94Q12767 1356 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 UGGT2Q9NYU1 1516 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 ADGBQ8N7X0 1667 aa4.44□□□□□ -1.7
CD55-208ENST00000476590 AKAP12Q02952 1782 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 PLA2R1Q13018 1463 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 IQGAP2Q13576 1575 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ELL2O00472 640 aaPredicted RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 NVLO15381 856 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 ATP9AO75110 1047 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 TRPA1O75762 1119 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 FKBP9O95302 570 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CYP1A1P04798 512 aaPredicted RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 S100A6P06703 90 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 MYL3P08590 195 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CTSHP09668 335 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ALAS1P13196 640 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 NAGAP17050 411 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 GJB2P29033 226 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 WEE1P30291 646 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 HSPA1LP34931 641 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 RXRGP48443 463 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CDK7P50613 346 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 BLVRAP53004 296 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 WNT7BP56706 349 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 AP2B1P63010 937 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 PPP2R2AP63151 447 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 AMPD2Q01433 879 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 FMR1Q06787 632 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD55-208ENST00000476590 GNA13Q14344 377 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ZNF423Q2M1K9 1284 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 FBLN7Q53RD9 439 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ODF2Q5BJF6 829 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ESCO1Q5FWF5 840 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 KLHL35Q6PF15 583 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 MARK2Q7KZI7 788 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 FASTKD5Q7L8L6 764 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 KIAA0907Q7Z7F0 614 aaPredicted RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 DDX42Q86XP3 938 aaKnown RBP eCLIP4.43□□□□□ -1.7
CD55-208ENST00000476590 HACE1Q8IYU2 909 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ALDH16A1Q8IZ83 802 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CADM3Q8N126 398 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 SLC35F6Q8N357 371 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ENDOVQ8N8Q3 282 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 TTC8Q8TAM2 541 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 PLEKHO2Q8TD55 490 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 FBXO41Q8TF61 875 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 GAB3Q8WWW8 586 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 SYMPKQ92797 1274 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 ZNF594Q96JF6 807 aaPredicted RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 ZIM3Q96PE6 472 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 MTMR9Q96QG7 549 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CIB1Q99828 191 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 HERC2P3Q9BVR0 1158 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CRNKL1Q9BZJ0 848 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 SHCBP1LQ9BZQ2 653 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 KRT23Q9C075 422 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 EPB41L1Q9H4G0 881 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 EHMT1Q9H9B1 1298 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 C12orf4Q9NQ89 552 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ARHGEF3Q9NR81 526 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 RRP7BPQ9NSQ0 103 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 THAP1Q9NVV9 213 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CYP39A1Q9NYL5 469 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 RIMKLBQ9ULI2 386 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 LIMCH1Q9UPQ0 1083 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 SPG7Q9UQ90 795 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 TBC1D30Q9Y2I9 924 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 JCADQ9P266 1359 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 MYH7P12883 1935 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 IQANK1A0A1B0GTG1 560 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 SNTNA6NMZ2 147 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 C19orf81C9J6K1 198 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 MUSKO15146 869 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ORC4O43929 436 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ADCY3O60266 1144 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CNOT3O75175 753 aaKnown RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 DDHD2O94830 711 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 MAP3K6O95382 1288 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CRYZL1O95825 349 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 KRT16P08779 473 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ENO2P09104 434 aaPredicted RBP4.43□□□□□ -1.7
CD55-208ENST00000476590 TPBGLP0DKB5 382 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CDK4P11802 303 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 ETS2P15036 469 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 EPB42P16452 691 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 PDCP20941 246 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 DRD4P21917 467 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 GNA11P29992 359 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CASP14P31944 242 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 VHLP40337 213 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 STAT3P40763 770 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 TSPAN7P41732 249 aa4.43□□□□□ -1.7
CD55-208ENST00000476590 CCR3P51677 355 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms