RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TMEM253P0C7T8 217 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 CCDC172P0C7W6 258 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 CYFIP1Q7L576 1253 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 LMBR1Q8WVP7 490 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 ATP6V0A1Q93050 837 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 KREMEN1Q96MU8 473 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 IWS1Q96ST2 819 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 NTPCRQ9BSD7 190 aaKnown RBP17.99■□□□□ 0.47
TVP23B-202ENST00000476139 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 LOXHD1Q8IVV2 1947 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 PSAPP07602 524 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 ITGA4P13612 1032 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 PRKCEQ02156 737 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 TREML2Q5T2D2 321 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 ABHD15Q6UXT9 468 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 RFFLQ8WZ73 363 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 POMGNT1Q8WZA1 660 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 GDF3Q9NR23 364 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 CWC15Q9P013 229 aaKnown RBP17.99■□□□□ 0.47
TVP23B-202ENST00000476139 DOCK1Q14185 1865 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 PARP14Q460N5 1801 aa17.99■□□□□ 0.47
TVP23B-202ENST00000476139 CYP26A1O43174 497 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 FTLP02792 175 aaPredicted RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 DLATP10515 647 aaKnown RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 SLC47A2Q86VL8 602 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 RPUSD2Q8IZ73 545 aaKnown RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 SCFD2Q8WU76 684 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 HES6Q96HZ4 224 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 PBKQ96KB5 322 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 PDLIM7Q9NR12 457 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 CYP26B1Q9NR63 512 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 SUCLA2Q9P2R7 463 aaPredicted RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 SSC5DA1L4H1 1573 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 SPATA31C2B4DYI2 1134 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 P4HA2O15460 535 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 USP2O75604 605 aaPredicted RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 MTERF2Q49AM1 385 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 IFT20Q8IY31 132 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 SH2D3CQ8N5H7 860 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 RDM1Q8NG50 284 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 ACTRT1Q8TDG2 376 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 CASKIN2Q8WXE0 1202 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 PCDHB18PQ96TA0 734 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 DDX47Q9H0S4 455 aaKnown RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 EXOC7Q9UPT5 735 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 NOC2LQ9Y3T9 749 aaKnown RBP17.98■□□□□ 0.47
TVP23B-202ENST00000476139 DOCK5Q9H7D0 1870 aa17.98■□□□□ 0.47
TVP23B-202ENST00000476139 ATP2A1O14983 1001 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 KRT14P02533 472 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 EPHB4P54760 987 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 PPATQ06203 517 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 TAS1R3Q7RTX0 852 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 FAM76AQ8TAV0 307 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 TAS1R2Q8TE23 839 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 KIFAP3Q92845 792 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 HNRNPDLO14979 420 aaKnown RBP17.97■□□□□ 0.47
TVP23B-202ENST00000476139 ATP4AP20648 1035 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 SEPT14Q6ZU15 432 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 NOP9Q86U38 636 aaKnown RBP17.97■□□□□ 0.47
TVP23B-202ENST00000476139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.97■□□□□ 0.47
TVP23B-202ENST00000476139 KIAA1217Q5T5P2 1943 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 ANKRD62A6NC57 917 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 MYO1CO00159 1063 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 TULP2O00295 520 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 CES2O00748 559 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 RFX1P22670 979 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 SYCE1Q8N0S2 351 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 TMEM143Q96AN5 459 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.97■□□□□ 0.47
TVP23B-202ENST00000476139 FAM213AQ9BRX8 229 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 PI4K2AQ9BTU6 479 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 AMFRQ9UKV5 643 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 RRP15Q9Y3B9 282 aaKnown RBP17.97■□□□□ 0.47
TVP23B-202ENST00000476139 NR2E1Q9Y466 385 aa17.97■□□□□ 0.47
TVP23B-202ENST00000476139 MAPK13O15264 365 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 SART1O43290 800 aaKnown RBP17.96■□□□□ 0.47
TVP23B-202ENST00000476139 DGAT1O75907 488 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 CALCAP01258 141 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 SNRPFP62306 86 aaKnown RBP17.96■□□□□ 0.47
TVP23B-202ENST00000476139 VGLL4Q14135 290 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 DCAF12L1Q5VU92 463 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 KRT39Q6A163 491 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 ANKRD35Q8N283 1001 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 R3HDMLQ9H3Y0 253 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 PHIPQ8WWQ0 1821 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 PGRMC1O00264 195 aaKnown RBP17.96■□□□□ 0.47
TVP23B-202ENST00000476139 KRIT1O00522 736 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 CHRNB2P17787 502 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 PRPF4BQ13523 1007 aaKnown RBP17.96■□□□□ 0.47
TVP23B-202ENST00000476139 NAA35Q5VZE5 725 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 EMBQ6PCB8 327 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 ADAT2Q7Z6V5 191 aaKnown RBP17.96■□□□□ 0.47
TVP23B-202ENST00000476139 EPS8L1Q8TE68 723 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 SPIRE2Q8WWL2 714 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
TVP23B-202ENST00000476139 RUBCNQ92622 972 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 TATDN2Q93075 761 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 ZIM3Q96PE6 472 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 RUFY1Q96T51 708 aa17.96■□□□□ 0.47
TVP23B-202ENST00000476139 POLR3FQ9H1D9 316 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms