RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 RGL1Q9NZL6 768 aa12.08□□□□□ -0.48
CDRT1-205ENST00000475944 C2CD2LO14523 706 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 INPPL1O15357 1258 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 MLH1P40692 756 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 CYP4A11Q02928 519 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 POU5F1BQ06416 359 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 TDGQ13569 410 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 TFDP1Q14186 410 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 CYP26C1Q6V0L0 522 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 POTEDQ86YR6 584 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 COLGALT2Q8IYK4 626 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 HACE1Q8IYU2 909 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
CDRT1-205ENST00000475944 FLCNQ8NFG4 579 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 CMASQ8NFW8 434 aaPredicted RBP12.07□□□□□ -0.48
CDRT1-205ENST00000475944 RPS6KC1Q96S38 1066 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 MAN1C1Q9NR34 630 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 DUSP12Q9UNI6 340 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 PRG3Q9Y2Y8 225 aaPredicted RBP12.07□□□□□ -0.48
CDRT1-205ENST00000475944 IPPQ9Y573 584 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 ARID2Q68CP9 1835 aa12.07□□□□□ -0.48
CDRT1-205ENST00000475944 MYO10Q9HD67 2058 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 ARL5CA6NH57 179 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 INO80B-WBP1J3KQ70 363 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 TSPAN1O60635 241 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 GLUD1P00367 558 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 NBL1P41271 181 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 GLUD2P49448 558 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 PTENP60484 403 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 DSC1Q08554 894 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 CTTNQ14247 550 aaKnown RBP12.06□□□□□ -0.48
CDRT1-205ENST00000475944 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-205ENST00000475944 TPH2Q8IWU9 490 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 FEZF2Q8TBJ5 459 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 WASF1Q92558 559 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 STAMQ92783 540 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 CCDC43Q96MW1 224 aaKnown RBP12.06□□□□□ -0.48
CDRT1-205ENST00000475944 GAD1Q99259 594 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 EIF2AQ9BY44 585 aaKnown RBP12.06□□□□□ -0.48
CDRT1-205ENST00000475944 RHOBTB2Q9BYZ6 727 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 TRIM6Q9C030 488 aaPredicted RBP12.06□□□□□ -0.48
CDRT1-205ENST00000475944 CSRNP2Q9H175 543 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 KCNK12Q9HB15 430 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 IGSF9Q9P2J2 1179 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 FBXL21Q9UKT6 434 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 GIT1Q9Y2X7 761 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 PLXNA3P51805 1871 aa12.06□□□□□ -0.48
CDRT1-205ENST00000475944 CCDC195A0A1B0GUA6 201 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 ZBTB39O15060 712 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 TEX28O15482 410 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 DGAT1O75907 488 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 AOC1P19801 751 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 KRT2P35908 639 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 SCNN1GP51170 649 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 DSG1Q02413 1049 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 CWF19L1Q69YN2 538 aaKnown RBP12.05□□□□□ -0.48
CDRT1-205ENST00000475944 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-205ENST00000475944 HDAC7Q8WUI4 952 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 CPB2Q96IY4 423 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 EIF2AK1Q9BQI3 630 aaKnown RBP12.05□□□□□ -0.48
CDRT1-205ENST00000475944 RTP3Q9BQQ7 232 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 COLEC11Q9BWP8 271 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 RXFP1Q9HBX9 757 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 WDR6Q9NNW5 1121 aaKnown RBP12.05□□□□□ -0.48
CDRT1-205ENST00000475944 XPNPEP1Q9NQW7 623 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 GJB4Q9NTQ9 266 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 ANKEF1Q9NU02 776 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 ORC3Q9UBD5 711 aaPredicted RBP12.05□□□□□ -0.48
CDRT1-205ENST00000475944 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 HES2Q9Y543 173 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 CLUHO75153 1309 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 C2orf16Q68DN1 1984 aa12.05□□□□□ -0.48
CDRT1-205ENST00000475944 PRR23AA6NEV1 266 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 PFKFB2O60825 505 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 SLITRK3O94933 977 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 LYPLA2O95372 231 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 C1RP00736 705 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 ARF4P18085 180 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-205ENST00000475944 GBP2P32456 591 aaPredicted RBP12.04□□□□□ -0.48
CDRT1-205ENST00000475944 MBTD1Q05BQ5 628 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 CAPSQ13938 189 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 ANKRD1Q15327 319 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 CALCRLQ16602 461 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 EARS2Q5JPH6 523 aaKnown RBP12.04□□□□□ -0.48
CDRT1-205ENST00000475944 KIAA0319Q5VV43 1072 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 ASCL5Q7RTU5 278 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 TAS1R1Q7RTX1 841 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 GPR65Q8IYL9 337 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 SIX5Q8N196 739 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 SMG7Q92540 1137 aaKnown RBP12.04□□□□□ -0.48
CDRT1-205ENST00000475944 SNX27Q96L92 541 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 ZFP42Q96MM3 310 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 APOL6Q9BWW8 343 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 RNF39Q9H2S5 420 aa12.04□□□□□ -0.48
CDRT1-205ENST00000475944 PLEKHA4Q9H4M7 779 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms