RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CXCL16Q9H2A7 254 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 GPRC5CQ9NQ84 441 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 USP20Q9Y2K6 914 aa7.82□□□□□ -1.16
HDAC3-207ENST00000475549 PLXNA4Q9HCM2 1894 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 USP34Q70CQ2 3546 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 KIAA1671Q9BY89 1806 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 A0A1B0GUA9 196 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 INO80B-WBP1J3KQ70 363 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 GAS2O43903 313 aaKnown RBP7.81□□□□□ -1.16
HDAC3-207ENST00000475549 BRD1O95696 1058 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 NEFLP07196 543 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 XRCC6P12956 609 aaKnown RBP eCLIP7.81□□□□□ -1.16
HDAC3-207ENST00000475549 ITGA4P13612 1032 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 AKAP5P24588 427 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 MLH1P40692 756 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 CLCN4P51793 760 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 VCPP55072 806 aaKnown RBP7.81□□□□□ -1.16
HDAC3-207ENST00000475549 ZNF174Q15697 407 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 ECM1Q16610 540 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 PTPN21Q16825 1174 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 RARS2Q5T160 578 aaKnown RBP7.81□□□□□ -1.16
HDAC3-207ENST00000475549 KIAA0319Q5VV43 1072 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 POTEGQ6S5H5 508 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 MAEAQ7L5Y9 396 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 ALYREFQ86V81 257 aaKnown RBP7.81□□□□□ -1.16
HDAC3-207ENST00000475549 PRSS33Q8NF86 280 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 RSPH1Q8WYR4 309 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 BSNDQ8WZ55 320 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 RABGGTAQ92696 567 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 B3GALT6Q96L58 329 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 MFSD14AQ96MC6 490 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 TMEM175Q9BSA9 504 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 NFKBIZQ9BYH8 718 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 CSRNP2Q9H175 543 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 NXF3Q9H4D5 531 aaKnown RBP7.81□□□□□ -1.16
HDAC3-207ENST00000475549 POLD4Q9HCU8 107 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 BRMS1Q9HCU9 246 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 KANSL3Q9P2N6 904 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 FAN1Q9Y2M0 1017 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 TECTAO75443 2155 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 EVPLQ92817 2033 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 MYO15AQ9UKN7 3530 aa7.81□□□□□ -1.16
HDAC3-207ENST00000475549 CNTNAP2Q9UHC6 1331 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 LOXHD1Q8IVV2 1947 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 TEX28O15482 410 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 NEMFO60524 1076 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 N4BP1O75113 896 aaKnown RBP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 ERLIN2O94905 339 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 EDN1P05305 212 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 ASGR2P07307 311 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 SRGAP2BP0DMP2 458 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 IGFBP6P24592 240 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 AXLP30530 894 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 CA8P35219 290 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 TOB1P50616 345 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 SCNN1GP51170 649 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 SIGLEC14Q08ET2 396 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 TCF15Q12870 199 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 GIT2Q14161 759 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 NBR1Q14596 966 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 PCBP1Q15365 356 aaKnown RBP eCLIP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 IL17AQ16552 155 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 TPRNQ4KMQ1 711 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 ATAT1Q5SQI0 421 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 CES5AQ6NT32 575 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 NOTUMQ6P988 496 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 POTEHQ6S545 545 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 TMC5Q6UXY8 1006 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 GPR149Q86SP6 731 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 CCDC83Q8IWF9 413 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 FBXL6Q8N531 539 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 FBXO18Q8NFZ0 1043 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 URGCPQ8TCY9 931 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 NECTIN4Q96NY8 510 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 POLR3CQ9BUI4 534 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 GPR62Q9BZJ7 368 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 POLR3FQ9H1D9 316 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 FZD8Q9H461 694 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 TSHZ2Q9NRE2 1034 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 CHST7Q9NS84 486 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 KLK14Q9P0G3 267 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 CACNG4Q9UBN1 327 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 LIMD1Q9UGP4 676 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 LIMCH1Q9UPQ0 1083 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 PRG3Q9Y2Y8 225 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-207ENST00000475549 PIEZO1Q92508 2521 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 DMDP11532 3685 aa7.8□□□□□ -1.16
HDAC3-207ENST00000475549 C2CD2LO14523 706 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 USO1O60763 962 aaKnown RBP7.79□□□□□ -1.16
HDAC3-207ENST00000475549 SOD2P04179 222 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 SPATA31D3P0C874 917 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 MYBP10242 640 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 KLRC2P26717 231 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 RPA1P27694 616 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 AVPR2P30518 371 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 OR1G1P47890 313 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 DSG1Q02413 1049 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 TRIM29Q14134 588 aa7.79□□□□□ -1.16
HDAC3-207ENST00000475549 TFDP1Q14186 410 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms