RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 DNAH12Q6ZR08 3092 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 TGFB1I1O43294 461 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-224ENST00000475524 NBNO60934 754 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
MCF2L-224ENST00000475524 HOXA11P31270 313 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-224ENST00000475524 POU5F1Q01860 360 aaKnown RBP16.6■□□□□ 0.25
MCF2L-224ENST00000475524 KCNA1Q09470 495 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 GPNMBQ14956 572 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 KYAT1Q16773 422 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 DCAF4L1Q3SXM0 396 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 MPZL3Q6UWV2 235 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 C7orf61Q8IZ16 206 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 RPUSD2Q8IZ73 545 aaKnown RBP16.6■□□□□ 0.25
MCF2L-224ENST00000475524 SEPT8Q92599 483 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 TSG101Q99816 390 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 BPIFA3Q9BQP9 254 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 ADPGKQ9BRR6 497 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 TARS2Q9BW92 718 aaKnown RBP16.6■□□□□ 0.25
MCF2L-224ENST00000475524 PTPRHQ9HD43 1115 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 NR2E3Q9Y5X4 410 aa16.6■□□□□ 0.25
MCF2L-224ENST00000475524 MICAL3Q7RTP6 2002 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 EFCAB14O75071 495 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 EDN1P05305 212 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 SKIP12755 728 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 RPL13P26373 211 aaKnown RBP16.59■□□□□ 0.25
MCF2L-224ENST00000475524 CD52P31358 61 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 RGS19P49795 217 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 MCL1Q07820 350 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 PPIGQ13427 754 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■■■□□ 16.7
MCF2L-224ENST00000475524 DSC3Q14574 896 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 CNKSR3Q6P9H4 555 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 SLC27A1Q6PCB7 646 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 NELFCDQ8IXH7 590 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 ZC3H3Q8IXZ2 948 aaKnown RBP16.59■□□□□ 0.25
MCF2L-224ENST00000475524 PDZD7Q9H5P4 517 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 C1orf112Q9NSG2 853 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 RNF216Q9NWF9 866 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-224ENST00000475524 MAPK8IP1Q9UQF2 711 aa16.59■□□□□ 0.25
MCF2L-224ENST00000475524 A0A0B4J269 797 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 ABLIM1O14639 778 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 CLDN3O15551 220 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 B4GALT5O43286 388 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 CSDE1O75534 798 aaKnown RBP16.58■□□□□ 0.24
MCF2L-224ENST00000475524 MCF2P10911 925 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 ZSCAN20P17040 1043 aaPredicted RBP16.58■□□□□ 0.24
MCF2L-224ENST00000475524 RAB27AP51159 221 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 CCL23P55773 120 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 NFX1Q12986 1120 aaKnown RBP16.58■□□□□ 0.24
MCF2L-224ENST00000475524 TTI2Q6NXR4 508 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 SLC39A4Q6P5W5 647 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 NELFBQ8WX92 580 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 SCLYQ96I15 445 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 SEMA6BQ9H3T3 888 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 KIAA1586Q9HCI6 787 aa16.58■□□□□ 0.24
MCF2L-224ENST00000475524 PIN4Q9Y237 131 aaKnown RBP16.58■□□□□ 0.24
MCF2L-224ENST00000475524 RALGAPA2Q2PPJ7 1873 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 MAPK13O15264 365 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ZNF623O75123 536 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 FGFR1OPO95684 399 aaKnown RBP16.57■□□□□ 0.24
MCF2L-224ENST00000475524 LDHAP00338 332 aaKnown RBP16.57■□□□□ 0.24
MCF2L-224ENST00000475524 FGFR4P22455 802 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ITGB8P26012 769 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 FKBP3Q00688 224 aaKnown RBP16.57■□□□□ 0.24
MCF2L-224ENST00000475524 NOLC1Q14978 699 aaKnown RBP eCLIP16.57■□□□□ 0.24
MCF2L-224ENST00000475524 TMEM132AQ24JP5 1023 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ZNF568Q3ZCX4 644 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ARMCX5Q6P1M9 558 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ENOX1Q8TC92 643 aaKnown RBP16.57■□□□□ 0.24
MCF2L-224ENST00000475524 RSPH1Q8WYR4 309 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 DPF3Q92784 378 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 MKNK1Q9BUB5 465 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 TSPYL2Q9H2G4 693 aaPredicted RBP16.57■□□□□ 0.24
MCF2L-224ENST00000475524 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 DMAC2Q9NW81 257 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 CTNND2Q9UQB3 1225 aa16.57■□□□□ 0.24
MCF2L-224ENST00000475524 ABHD14A-ACY1A0A1B0GW23 586 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 TTLL13PA6NNM8 815 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 ANKRD63C9JTQ0 380 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 IKBKBO14920 756 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 OGTO15294 1046 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 BAIAP3O94812 1187 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 ADSSP30520 456 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 FPGSQ05932 587 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 ENPEPQ07075 957 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 KLHL10Q6JEL2 608 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 C11orf57Q6ZUT1 292 aaPredicted RBP16.56■□□□□ 0.24
MCF2L-224ENST00000475524 HACE1Q8IYU2 909 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 DBF4BQ8NFT6 615 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 TET1Q8NFU7 2136 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 NOC3LQ8WTT2 800 aaKnown RBP16.56■□□□□ 0.24
MCF2L-224ENST00000475524 POMGNT1Q8WZA1 660 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 FBXL18Q96ME1 805 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 OSBPL7Q9BZF2 842 aa16.56■□□□□ 0.24
MCF2L-224ENST00000475524 DNAJC25Q9H1X3 360 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms