RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 DDHD2O94830 711 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 GLUD2P49448 558 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 PTENP60484 403 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 DSG1Q02413 1049 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 INF2Q27J81 1249 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 COLGALT2Q8IYK4 626 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
TTC38-206ENST00000475467 RNF149Q8NC42 400 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 WASF1Q92558 559 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 MTRQ99707 1265 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 VAV3Q9UKW4 847 aa13.78□□□□□ -0.2
TTC38-206ENST00000475467 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 DGAT1O75907 488 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 LYPLA2O95372 231 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 EFEMP2O95967 443 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 WEE2P0C1S8 567 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.21
TTC38-206ENST00000475467 PLXNA3P51805 1871 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 AK2P54819 239 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 DSC1Q08554 894 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 TOB2Q14106 344 aaPredicted RBP13.77□□□□□ -0.21
TTC38-206ENST00000475467 EMC2Q15006 297 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 KIAA0319Q5VV43 1072 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 RTL10Q7L3V2 364 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 BCL7CQ8WUZ0 217 aaPredicted RBP13.77□□□□□ -0.21
TTC38-206ENST00000475467 LXNQ9BS40 222 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 VN1R3Q9BXE9 311 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 TRIM6Q9C030 488 aaPredicted RBP13.77□□□□□ -0.21
TTC38-206ENST00000475467 CSRNP2Q9H175 543 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
TTC38-206ENST00000475467 MAN1C1Q9NR34 630 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 STK36Q9NRP7 1315 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 CHST7Q9NS84 486 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 CDH22Q9UJ99 828 aa13.77□□□□□ -0.21
TTC38-206ENST00000475467 CCDC195A0A1B0GUA6 201 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 TMEM150BA6NC51 233 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 EML1O00423 815 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 POMCP01189 267 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 SRFP11831 508 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 NPEPPSP55786 919 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 NPY5RQ15761 445 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 XKR9Q5GH70 373 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 UBXN11Q5T124 520 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 PLA2G4FQ68DD2 849 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 CWF19L1Q69YN2 538 aaKnown RBP13.76□□□□□ -0.21
TTC38-206ENST00000475467 PHLDB3Q6NSJ2 640 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 PDXDC1Q6P996 788 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
TTC38-206ENST00000475467 ASCL5Q7RTU5 278 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 DTWD2Q8NBA8 298 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 GJA10Q969M2 543 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 SH2D3AQ9BRG2 576 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 PHF20Q9BVI0 1012 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 BRMS1Q9HCU9 246 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 ANKEF1Q9NU02 776 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 IPPQ9Y573 584 aa13.76□□□□□ -0.21
TTC38-206ENST00000475467 USP34Q70CQ2 3546 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 CLUHO75153 1309 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 ARL5CA6NH57 179 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 TEX28O15482 410 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 SLC37A4O43826 429 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 CCNT1O60563 726 aaKnown RBP13.75□□□□□ -0.21
TTC38-206ENST00000475467 NPR3P17342 541 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 RFX1P22670 979 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 GBP2P32456 591 aaPredicted RBP13.75□□□□□ -0.21
TTC38-206ENST00000475467 OR1G1P47890 313 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 GRIK3Q13003 919 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 SIX5Q8N196 739 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 SMG8Q8ND04 991 aaKnown RBP13.75□□□□□ -0.21
TTC38-206ENST00000475467 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 SHDQ96IW2 340 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 PRIMPOLQ96LW4 560 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 CCDC43Q96MW1 224 aaKnown RBP13.75□□□□□ -0.21
TTC38-206ENST00000475467 PIDD1Q9HB75 910 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 MARCH5Q9NX47 278 aa13.75□□□□□ -0.21
TTC38-206ENST00000475467 MTCL1Q9Y4B5 1905 aaKnown RBP13.74□□□□□ -0.21
TTC38-206ENST00000475467 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 TSPAN1O60635 241 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 SSBP05455 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
TTC38-206ENST00000475467 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
TTC38-206ENST00000475467 SLC27A1Q6PCB7 646 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 SMG7Q92540 1137 aaKnown RBP13.74□□□□□ -0.21
TTC38-206ENST00000475467 HAS1Q92839 578 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 GAD1Q99259 594 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 PRKD2Q9BZL6 878 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 MINDY3Q9H8M7 445 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 SLC2A4RGQ9NR83 387 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 PCDHA12Q9UN75 941 aa13.74□□□□□ -0.21
TTC38-206ENST00000475467 PRG3Q9Y2Y8 225 aaPredicted RBP13.74□□□□□ -0.21
TTC38-206ENST00000475467 A0A1B0GUA9 196 aa13.73□□□□□ -0.21
TTC38-206ENST00000475467 STK25O00506 426 aa13.73□□□□□ -0.21
TTC38-206ENST00000475467 C2CD2LO14523 706 aa13.73□□□□□ -0.21
TTC38-206ENST00000475467 B4GALT3O60512 393 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms