RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PCDHB2Q9Y5E7 798 aa18.64■□□□□ 0.57
SCAF11-206ENST00000474828 PVALEFA0A1B0GWK0 134 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 LINC01553A4QN01 128 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 HOXA2O43364 376 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 KRT18P05783 430 aaKnown RBP18.63■□□□□ 0.57
SCAF11-206ENST00000474828 CA3P07451 260 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 DEFB123Q8N688 67 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 HVCN1Q96D96 273 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 PAGE5Q96GU1 130 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 CPB2Q96IY4 423 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 ZBED2Q9BTP6 218 aa18.63■□□□□ 0.57
SCAF11-206ENST00000474828 N4BP3O15049 544 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 UPP2O95045 317 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 ZNF202O95125 648 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 ERVK-21P61565 698 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 CLLU1OSQ5K130 101 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 AGMOQ6ZNB7 445 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 KRBA2Q6ZNG9 492 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 SFR1Q86XK3 245 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 MAP4K3Q8IVH8 894 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 FAM178BQ8IXR5 827 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 ELOA2Q8IYF1 753 aaPredicted RBP18.62■□□□□ 0.57
SCAF11-206ENST00000474828 CEP57L1Q8IYX8 460 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 STAMQ92783 540 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 CASD1Q96PB1 797 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 YME1L1Q96TA2 773 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 EIF2AQ9BY44 585 aaKnown RBP18.62■□□□□ 0.57
SCAF11-206ENST00000474828 MRPL4Q9BYD3 311 aaKnown RBP18.62■□□□□ 0.57
SCAF11-206ENST00000474828 TMEM117Q9H0C3 514 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 NKX2-4Q9H2Z4 354 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 TBX20Q9UMR3 447 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 IPPQ9Y573 584 aa18.62■□□□□ 0.57
SCAF11-206ENST00000474828 MYH11P35749 1972 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 KLRC4O43908 158 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 FAM160A1Q05DH4 1040 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 ALCAMQ13740 583 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 ATF7IP2Q5U623 682 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 EEF1DP3Q658K8 133 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 UNC13DQ70J99 1090 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 Q7L0L9 218 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 CCDC65Q8IXS2 484 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 PGBD4Q96DM1 585 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 TIGD1Q96MW7 591 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 ZNF576Q9H609 170 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 SLC28A3Q9HAS3 691 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 UBN1Q9NPG3 1134 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 PANK4Q9NVE7 773 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 LRFN2Q9ULH4 789 aa18.61■□□□□ 0.57
SCAF11-206ENST00000474828 C5orf67F2Z3F1 127 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 TOM1L1O75674 476 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 NMT1P30419 496 aaKnown RBP18.6■□□□□ 0.57
SCAF11-206ENST00000474828 COASYQ13057 564 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 CUL4BQ13620 913 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 DCAF4L1Q3SXM0 396 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 FAM117BQ6P1L5 589 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 EPM2AIP1Q7L775 607 aaPredicted RBP18.6■□□□□ 0.57
SCAF11-206ENST00000474828 SAMD11Q96NU1 681 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 TARS2Q9BW92 718 aaKnown RBP18.6■□□□□ 0.57
SCAF11-206ENST00000474828 STYXL1Q9Y6J8 313 aa18.6■□□□□ 0.57
SCAF11-206ENST00000474828 FNDC1Q4ZHG4 1894 aaPredicted RBP18.6■□□□□ 0.57
SCAF11-206ENST00000474828 MEIS3P2A8K0S8 358 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 GTPBP6O43824 516 aaPredicted RBP18.59■□□□□ 0.57
SCAF11-206ENST00000474828 OFD1O75665 1012 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 FGFR1P11362 822 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 MCL1Q07820 350 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 STRN3Q13033 797 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 HERC4Q5GLZ8 1057 aaPredicted RBP18.59■□□□□ 0.57
SCAF11-206ENST00000474828 PPP2R2DQ66LE6 453 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 KANK3Q6NY19 840 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 USP20Q9Y2K6 914 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 GIT1Q9Y2X7 761 aa18.59■□□□□ 0.57
SCAF11-206ENST00000474828 K7ENM7 598 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 FAM189A1O60320 539 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 GADD45BO75293 160 aaPredicted RBP18.58■□□□□ 0.56
SCAF11-206ENST00000474828 MCF2P10911 925 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 GATMP50440 423 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 CASP5P51878 434 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 DPYDQ12882 1025 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
SCAF11-206ENST00000474828 ZNF697Q5TEC3 545 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 MPZL3Q6UWV2 235 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 LRRC55Q6ZSA7 311 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 CDR2LQ86X02 465 aaPredicted RBP18.58■□□□□ 0.56
SCAF11-206ENST00000474828 FIBCD1Q8N539 461 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 GSTCDQ8NEC7 633 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 SPATA20Q8TB22 786 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 TGS1Q96RS0 853 aaKnown RBP18.58■□□□□ 0.56
SCAF11-206ENST00000474828 FGFBP2Q9BYJ0 223 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 CDT1Q9H211 546 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 NXF3Q9H4D5 531 aaKnown RBP18.58■□□□□ 0.56
SCAF11-206ENST00000474828 CWH43Q9H720 699 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 MTMR10Q9NXD2 777 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 PCDHB13Q9Y5F0 798 aa18.58■□□□□ 0.56
SCAF11-206ENST00000474828 MRPL42Q9Y6G3 142 aaKnown RBP18.58■□□□□ 0.56
SCAF11-206ENST00000474828 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 NPTXRO95502 500 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 IDEP14735 1019 aa18.57■□□□□ 0.56
SCAF11-206ENST00000474828 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
SCAF11-206ENST00000474828 CASP1P29466 404 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms