RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 REXO1L1PQ8IX06 675 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TTC5Q8N0Z6 440 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DEPDC4Q8N2C3 294 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 IFI44Q8TCB0 444 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CENPIQ92674 756 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 GFM2Q969S9 779 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 GPRASP2Q96D09 838 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 VPS39Q96JC1 886 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZDHHC15Q96MV8 337 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 NT5C1BQ96P26 610 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 LENG8Q96PV6 779 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 SEC62Q99442 399 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 AIFM2Q9BRQ8 373 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DRC3Q9H069 523 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 C2orf40Q9H1Z8 148 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 MRM3Q9HC36 420 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 SPON1Q9HCB6 807 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TM9SF3Q9HD45 589 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SEMA3GQ9NS98 782 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 FAM217BQ9NTX9 383 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 PARP3Q9Y6F1 533 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TLL2Q9Y6L7 1015 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ERICH2A1L162 156 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 NPC1O15118 1278 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 POU2F2P09086 479 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CCDC166P0CW27 439 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CPA1P15085 419 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CSF2RAP15509 400 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TBXAS1P24557 533 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ADSLP30566 484 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 HOXA11P31270 313 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ACTN2P35609 894 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 IL6STP40189 918 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 MAPK8P45983 427 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PCP4P48539 62 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PPFIA1Q13136 1202 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 KCNAB2Q13303 367 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SGCAQ16586 387 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SKOR2Q2VWA4 1001 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 CDONQ4KMG0 1287 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 MDH1BQ5I0G3 518 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 EFHC1Q5JVL4 640 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 C1orf185Q5T7R7 199 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CNNM4Q6P4Q7 775 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CYB5D1Q6P9G0 228 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TUBA3EQ6PEY2 450 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 C15orf52Q6ZUT6 534 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 NLRP8Q86W28 1048 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ANKRD52Q8NB46 1076 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 TTC13Q8NBP0 860 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 C1orf216Q8TAB5 229 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ADAM32Q8TC27 787 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 LZICQ8WZA0 190 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 HDAC2Q92769 488 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZC3H10Q96K80 434 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 UBXN10Q96LJ8 280 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 BRIP1Q9BX63 1249 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PAIP1Q9H074 479 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 NT5C3AQ9H0P0 336 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 HAUS4Q9H6D7 363 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.75□□□□□ -1.81
UBR3-208ENST00000474426 VAV3Q9UKW4 847 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SH3GLB1Q9Y371 365 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 RRP7AQ9Y3A4 280 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZFP37Q9Y6Q3 630 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZNF335Q9H4Z2 1342 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 RPAP1Q9BWH6 1393 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 CUX2O14529 1486 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 A6NNZ2 444 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 FOXO6A8MYZ6 492 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CHUKO15111 745 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 RRP8O43159 456 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZPR1O75312 459 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 KLHL2O95198 593 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 POLBP06746 335 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SFPQP23246 707 aaKnown RBP eCLIP3.75□□□□□ -1.81
UBR3-208ENST00000474426 IL32P24001 234 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 SOX5P35711 763 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CCT6AP40227 531 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 KCNJ6P48051 423 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 THOP1P52888 689 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 YARSP54577 528 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 KRT85P78386 507 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DOC2AQ14183 400 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 PTK2BQ14289 1009 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 GBX1Q14549 363 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 CBX2Q14781 532 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 SF3B4Q15427 424 aaKnown RBP eCLIP3.75□□□□□ -1.815e-7■■■■■ 32.8
UBR3-208ENST00000474426 CWF19L2Q2TBE0 894 aaKnown RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZACNQ401N2 412 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 XKR3Q5GH77 459 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 DCAF17Q5H9S7 520 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 AKAP4Q5JQC9 854 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 GKAP1Q5VSY0 366 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 ZNF772Q68DY9 489 aaPredicted RBP3.75□□□□□ -1.81
UBR3-208ENST00000474426 SH3RF1Q7Z6J0 888 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 STK32CQ86UX6 486 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 VPS37DQ86XT2 251 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 ADGRG2Q8IZP9 1017 aa3.75□□□□□ -1.81
UBR3-208ENST00000474426 MFSD2AQ8NA29 543 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms