RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 FAM26FQ5R3K3 315 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 ATF7IP2Q5U623 682 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 EEF1DP3Q658K8 133 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 SLC27A1Q6PCB7 646 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 NPAS4Q8IUM7 802 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 GLIS3Q8NEA6 775 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 CCDC51Q96ER9 411 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 PCDHB2Q9Y5E7 798 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 PCDHB13Q9Y5F0 798 aa19.91■□□□□ 0.78
SNRPB-203ENST00000474384 GJB5O95377 273 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 NPTXRO95502 500 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 STAG3L1P0CL83 205 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 ABCD1P33897 745 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 LRIT3Q3SXY7 679 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 ERCC4Q92889 916 aaPredicted RBP19.9■□□□□ 0.78
SNRPB-203ENST00000474384 BICD1Q96G01 975 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 ELAC1Q9H777 363 aaKnown RBP19.9■□□□□ 0.78
SNRPB-203ENST00000474384 SLC39A2Q9NP94 309 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 EXOC1Q9NV70 894 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 TMEM161AQ9NX61 479 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 HOOK1Q9UJC3 728 aaKnown RBP19.9■□□□□ 0.78
SNRPB-203ENST00000474384 TNFSF13BQ9Y275 285 aa19.9■□□□□ 0.78
SNRPB-203ENST00000474384 ZNF623O75123 536 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 PRPF6O94906 941 aaKnown RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 SKIP12755 728 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 ATF7P17544 494 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 PBX2P40425 430 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 RAB27AP51159 221 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 KCNA1Q09470 495 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 LAMA3Q16787 3333 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 ZNF598Q86UK7 904 aaKnown RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 MAP4K3Q8IVH8 894 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 ELOA2Q8IYF1 753 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 SMG8Q8ND04 991 aaKnown RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 LPPQ93052 612 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 HVCN1Q96D96 273 aa19.89■□□□□ 0.77
SNRPB-203ENST00000474384 ZBTB45Q96K62 511 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 TRIM6Q9C030 488 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 RNF216Q9NWF9 866 aaPredicted RBP19.89■□□□□ 0.77
SNRPB-203ENST00000474384 TLL1O43897 1013 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 EOMESO95936 686 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 MYOGP15173 224 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 GATMP50440 423 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 STK4Q13043 487 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 PSMD2Q13200 908 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 ALCAMQ13740 583 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 L1TD1Q5T7N2 865 aaKnown RBP19.88■□□□□ 0.77
SNRPB-203ENST00000474384 ZPBP2Q6X784 338 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 MRPL10Q7Z7H8 261 aaKnown RBP19.88■□□□□ 0.77
SNRPB-203ENST00000474384 ZBTB33Q86T24 672 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 CCDC47Q96A33 483 aaKnown RBP19.88■□□□□ 0.77
SNRPB-203ENST00000474384 ACCSQ96QU6 501 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 RAD9AQ99638 391 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 ADPGKQ9BRR6 497 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 TCHPQ9BT92 498 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 PBX4Q9BYU1 374 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 IKZF4Q9H2S9 585 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 PTPRHQ9HD43 1115 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 HES2Q9Y543 173 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 IPPQ9Y573 584 aa19.88■□□□□ 0.77
SNRPB-203ENST00000474384 MEIS3P2A8K0S8 358 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 HNRNPDLO14979 420 aaKnown RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 TOM1L1O75674 476 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 DGKIO75912 1065 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 PIGRP01833 764 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 FGFR1P11362 822 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 LIG4P49917 911 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 HTRA4P83105 476 aaPredicted RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 SMAD3P84022 425 aaKnown RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 CAMK4Q16566 473 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 HABP4Q5JVS0 413 aaKnown RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 STXBP4Q6ZWJ1 553 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 EPM2AIP1Q7L775 607 aaPredicted RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 GPT2Q8TD30 523 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 PGBD4Q96DM1 585 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 APOL6Q9BWW8 343 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 NXF3Q9H4D5 531 aaKnown RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 RNF19AQ9NV58 838 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 ANKFY1Q9P2R3 1169 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 YBX2Q9Y2T7 364 aaKnown RBP19.87■□□□□ 0.77
SNRPB-203ENST00000474384 INSL6Q9Y581 213 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 PCDHA5Q9Y5H7 936 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 PCDHA11Q9Y5I1 949 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 GBF1Q92538 1859 aa19.87■□□□□ 0.77
SNRPB-203ENST00000474384 ANKRD63C9JTQ0 380 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 SOX1O00570 391 aaPredicted RBP19.86■□□□□ 0.77
SNRPB-203ENST00000474384 ABLIM1O14639 778 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 RHOBTB3O94955 611 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 SMC2O95347 1197 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 ITGA4P13612 1032 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 PROZP22891 400 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 MCM4P33991 863 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 MATR3P43243 847 aaKnown RBP eCLIP19.86■□□□□ 0.77
SNRPB-203ENST00000474384 KCNB1Q14721 858 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 DCAF4L1Q3SXM0 396 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 ZNF568Q3ZCX4 644 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 SLC39A4Q6P5W5 647 aa19.86■□□□□ 0.77
SNRPB-203ENST00000474384 MPZL3Q6UWV2 235 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms