RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
DDX56-209ENST00000473924 TBC1D7Q9P0N9 293 aa13.64□□□□□ -0.23
DDX56-209ENST00000473924 TMEM265A0A087WTH1 108 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 TBKBP1A7MCY6 615 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 ZNF623O75123 536 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 GCNT3O95395 438 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 EDN1P05305 212 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 ITGA4P13612 1032 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 CASP1P29466 404 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX56-209ENST00000473924 GATMP50440 423 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 FAM160A1Q05DH4 1040 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 CUL4BQ13620 913 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 NT5DC1Q5TFE4 455 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 GPR153Q6NV75 609 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 KANK3Q6NY19 840 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 CNNM4Q6P4Q7 775 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 TAS1R3Q7RTX0 852 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 TMEM87AQ8NBN3 555 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 LPPQ93052 612 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
DDX56-209ENST00000473924 ACO2Q99798 780 aaKnown RBP13.63□□□□□ -0.23
DDX56-209ENST00000473924 TARS2Q9BW92 718 aaKnown RBP13.63□□□□□ -0.23
DDX56-209ENST00000473924 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 TBX20Q9UMR3 447 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 TNFSF13BQ9Y275 285 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 IPPQ9Y573 584 aa13.63□□□□□ -0.23
DDX56-209ENST00000473924 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 GADD45BO75293 160 aaPredicted RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 MYL1P05976 194 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 LIG4P49917 911 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 GTF2BQ00403 316 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 TAP1Q03518 808 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 COASYQ13057 564 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ZNF568Q3ZCX4 644 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ZC2HC1CQ53FD0 456 aaPredicted RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 SPOUT1Q5T280 376 aaKnown RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 EEF1DP3Q658K8 133 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 STXBP4Q6ZWJ1 553 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 UNC13DQ70J99 1090 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 MRPL10Q7Z7H8 261 aaKnown RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 ZNF598Q86UK7 904 aaKnown RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 FMR1NBQ8N0W7 255 aaPredicted RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
DDX56-209ENST00000473924 HELQQ8TDG4 1101 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 FAM161BQ96MY7 647 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 FIZ1Q96SL8 496 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 TMEM117Q9H0C3 514 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ST6GALNAC4Q9H4F1 302 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ZNF576Q9H609 170 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 RSAD1Q9HA92 442 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 UBN1Q9NPG3 1134 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 ANKFY1Q9P2R3 1169 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 HES2Q9Y543 173 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 PCDHB13Q9Y5F0 798 aa13.62□□□□□ -0.23
DDX56-209ENST00000473924 PVALEFA0A1B0GWK0 134 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 MEIS3P2A8K0S8 358 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 HNRNPDLO14979 420 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 PRPF40AO75400 957 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 HARSP12081 509 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 UBE2HP62256 183 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 ALCAMQ13740 583 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 SMG8Q8ND04 991 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 CCDC47Q96A33 483 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 HVCN1Q96D96 273 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 TGS1Q96RS0 853 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 EXOC1Q9NV70 894 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 PARP2Q9UGN5 583 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 HOOK1Q9UJC3 728 aaKnown RBP13.61□□□□□ -0.23
DDX56-209ENST00000473924 MTUS1Q9ULD2 1270 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
DDX56-209ENST00000473924 CLDN3O15551 220 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 KINO60870 393 aaKnown RBP13.6□□□□□ -0.23
DDX56-209ENST00000473924 NR1I2O75469 434 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 TOM1L1O75674 476 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 ARHGEF15O94989 841 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 MYBP10242 640 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 AKAP5P24588 427 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
DDX56-209ENST00000473924 CLLU1OSQ5K130 101 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 FAM26FQ5R3K3 315 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 MPZL3Q6UWV2 235 aa13.6□□□□□ -0.23
DDX56-209ENST00000473924 AGMOQ6ZNB7 445 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms