RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.5
SSBP1-209ENST00000473783 NLRP7Q8WX94 980 aa11.9□□□□□ -0.5
SSBP1-209ENST00000473783 ZNF668Q96K58 619 aaPredicted RBP11.9□□□□□ -0.5
SSBP1-209ENST00000473783 FAM167AQ96KS9 214 aa11.9□□□□□ -0.5
SSBP1-209ENST00000473783 DSCC1Q9BVC3 393 aa11.9□□□□□ -0.5
SSBP1-209ENST00000473783 MARCH5Q9NX47 278 aa11.9□□□□□ -0.5
SSBP1-209ENST00000473783 FNIP2Q9P278 1114 aa11.9□□□□□ -0.5
SSBP1-209ENST00000473783 COL4A2P08572 1712 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 ERICH2A1L162 156 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 CHURC1-FNTBB4DL54 471 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
SSBP1-209ENST00000473783 MEIS1O00470 390 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 ECI2O75521 394 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 FNTBP49356 437 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 CDC42EP1Q00587 391 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 CREMQ03060 361 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 FOXC1Q12948 553 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 TAS1R1Q7RTX1 841 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 LONP2Q86WA8 852 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 KIF12Q96FN5 646 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 LOXL4Q96JB6 756 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 MBOAT7Q96N66 472 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 GCOM2Q9BZD3 368 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-209ENST00000473783 CHST7Q9NS84 486 aa11.89□□□□□ -0.51
SSBP1-209ENST00000473783 NDRG2Q9UN36 371 aaKnown RBP11.89□□□□□ -0.51
SSBP1-209ENST00000473783 PIN4Q9Y237 131 aaKnown RBP11.89□□□□□ -0.51
SSBP1-209ENST00000473783 PRG3Q9Y2Y8 225 aaPredicted RBP11.89□□□□□ -0.51
SSBP1-209ENST00000473783 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 TICRRQ7Z2Z1 1910 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 LOC400499M0QZD8 3231 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 IFIT3O14879 490 aaKnown RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 CSDE1O75534 798 aaKnown RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 PAPSS2O95340 614 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 HOXA9P31269 272 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 RBM25P49756 843 aaKnown RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 PDE1AP54750 535 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 NTHL1P78549 312 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 SATB1Q01826 763 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 ZNF252P-AS1Q0IIN9 211 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 SRSF5Q13243 272 aaKnown RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 AGMOQ6ZNB7 445 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 CEP68Q76N32 757 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 NIPA1Q7RTP0 329 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 CATIPQ7Z7H3 387 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 NPAS3Q8IXF0 933 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 MAP3K14Q99558 947 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 INO80BQ9C086 356 aaPredicted RBP11.88□□□□□ -0.51
SSBP1-209ENST00000473783 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
SSBP1-209ENST00000473783 PDCD11Q14690 1871 aaKnown RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 DHX15O43143 795 aaKnown RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 ABCB7O75027 752 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 XYLBO75191 536 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 TRDNQ13061 729 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 SART3Q15020 963 aaKnown RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 TRMT1LQ7Z2T5 733 aaKnown RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 SMAP1Q8IYB5 467 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 ITFG1Q8TB96 612 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 LZTS2Q9BRK4 669 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 ARRDC1-AS1Q9H2J1 176 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 LMAN1LQ9HAT1 526 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
SSBP1-209ENST00000473783 FBXW11Q9UKB1 542 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 ACACAQ13085 2346 aa11.87□□□□□ -0.51
SSBP1-209ENST00000473783 LAMA1P25391 3075 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 BPTFQ12830 3046 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 EPN2O95208 641 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 PSAPP07602 524 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 POU2F2P09086 479 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 SDSP20132 328 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 SPINK2P20155 84 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 OR1G1P47890 313 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 AFF1P51825 1210 aaKnown RBP11.86□□□□□ -0.51
SSBP1-209ENST00000473783 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 SOWAHCQ53LP3 525 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-209ENST00000473783 PPM1LQ5SGD2 360 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 ZNF746Q6NUN9 644 aaPredicted RBP11.86□□□□□ -0.51
SSBP1-209ENST00000473783 MRPL10Q7Z7H8 261 aaKnown RBP11.86□□□□□ -0.51
SSBP1-209ENST00000473783 GLYCTKQ8IVS8 523 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 COLGALT2Q8IYK4 626 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 SCNM1Q9BWG6 230 aa11.86□□□□□ -0.51
SSBP1-209ENST00000473783 PCNX2A6NKB5 2137 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 K7ESF4 209 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 IPO5O00410 1097 aaKnown RBP11.85□□□□□ -0.51
SSBP1-209ENST00000473783 AXIN1O15169 862 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 NR1I2O75469 434 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 ZIC2O95409 532 aaPredicted RBP11.85□□□□□ -0.51
SSBP1-209ENST00000473783 FOSP01100 380 aaPredicted RBP11.85□□□□□ -0.51
SSBP1-209ENST00000473783 POMCP01189 267 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
SSBP1-209ENST00000473783 HOXA6P31267 233 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 GNAQP50148 359 aa11.85□□□□□ -0.51
SSBP1-209ENST00000473783 DSC1Q08554 894 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms