RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 SCP2P22307 547 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 ADSSP30520 456 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 LIG4P49917 911 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 EFNA5P52803 228 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
SP140-208ENST00000473711 PTENP60484 403 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 MYBPC2Q14324 1141 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 CDCA2Q69YH5 1023 aaPredicted RBP11.74□□□□□ -0.53
SP140-208ENST00000473711 RUFY4Q6ZNE9 571 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 TRIM59Q8IWR1 403 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 C12orf56Q8IXR9 622 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 XXYLT1Q8NBI6 393 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 ZSWIM2Q8NEG5 633 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 SH3TC2Q8TF17 1288 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 POMGNT1Q8WZA1 660 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 KCNN1Q92952 543 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 FDXACB1Q9BRP7 624 aaPredicted RBP11.74□□□□□ -0.53
SP140-208ENST00000473711 C2orf40Q9H1Z8 148 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 NDST4Q9H3R1 872 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 METTL14Q9HCE5 456 aaKnown RBP11.74□□□□□ -0.53
SP140-208ENST00000473711 HSPBP1Q9NZL4 362 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 PTPN22Q9Y2R2 807 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.74□□□□□ -0.53
SP140-208ENST00000473711 CASP8AP2Q9UKL3 1982 aa11.74□□□□□ -0.53
SP140-208ENST00000473711 SMIM35A0A1B0GVV1 85 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 MBLAC1A4D2B0 266 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 TULP1O00294 542 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 EDN1P05305 212 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 PRKCBP05771 671 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 GNAT1P11488 350 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 PBX1P40424 430 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 MATR3P43243 847 aaKnown RBP eCLIP11.73□□□□□ -0.53
SP140-208ENST00000473711 PHKA2P46019 1235 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 NLRP11P59045 1033 aaKnown RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 ADAM17P78536 824 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 TMEM62Q0P6H9 643 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 MAPK6Q16659 721 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 FAM47CQ5HY64 1035 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 FKBP15Q5T1M5 1219 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 SPECC1LQ69YQ0 1117 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 CCSAPQ6IQ19 270 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 RNF180Q86T96 592 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 PCSK9Q8NBP7 692 aaKnown RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 DNAJB3Q8WWF6 145 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 NLRP7Q8WX94 980 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 VTI1AQ96AJ9 217 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 SAAL1Q96ER3 474 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 BORCS6Q96GS4 357 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 ZBTB45Q96K62 511 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 PCMTD1Q96MG8 357 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 INO80BQ9C086 356 aaPredicted RBP11.73□□□□□ -0.53
SP140-208ENST00000473711 CCDC113Q9H0I3 377 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 IMPACTQ9P2X3 320 aa11.73□□□□□ -0.53
SP140-208ENST00000473711 MSCO60682 206 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
SP140-208ENST00000473711 PIGRP01833 764 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 KRT13P13646 458 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 GARTP22102 1010 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
SP140-208ENST00000473711 GPC3P51654 580 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 LSM11P83369 360 aaKnown RBP eCLIP11.72□□□□□ -0.536e-26■■■■■ 152.8
SP140-208ENST00000473711 MBTD1Q05BQ5 628 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 GOLGA8FQ08AF8 430 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 GOLGA8DPQ0D2H9 430 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 TBX2Q13207 712 aaPredicted RBP11.72□□□□□ -0.53
SP140-208ENST00000473711 SYCP1Q15431 976 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 DCAF17Q5H9S7 520 aaPredicted RBP11.72□□□□□ -0.53
SP140-208ENST00000473711 TCERG1LQ5VWI1 586 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 SLFN12LQ6IEE8 588 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 CCDC155Q8N6L0 562 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 TMEM174Q8WUU8 243 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
SP140-208ENST00000473711 FZD8Q9H461 694 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 MINDY3Q9H8M7 445 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 IFT122Q9HBG6 1241 aa11.72□□□□□ -0.53
SP140-208ENST00000473711 A0A1W2PQC6 194 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 ACKR2O00590 384 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 AFPP02771 609 aaKnown RBP11.71□□□□□ -0.53
SP140-208ENST00000473711 ADRB2P07550 413 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 IQCF3P0C7M6 154 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 KLK7P49862 253 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 ACLYP53396 1101 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 PPP2R3AQ06190 1150 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 RBL2Q08999 1139 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 PRPF4BQ13523 1007 aaKnown RBP11.71□□□□□ -0.53
SP140-208ENST00000473711 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
SP140-208ENST00000473711 GDF6Q6KF10 455 aaPredicted RBP11.71□□□□□ -0.53
SP140-208ENST00000473711 ZBTB33Q86T24 672 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms