RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 FZD9O00144 591 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 NFKBIEO00221 500 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 VWA5AO00534 786 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ATP2A1O14983 1001 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 NKRFO15226 690 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 PMM2O15305 246 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 TLR2O60603 784 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 CLSTN1O94985 981 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 MYCLP12524 364 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ERCC3P19447 782 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 EIF2AK2P19525 551 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 YWHABP31946 246 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 SOX5P35711 763 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 PLA2G4AP47712 749 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 CYP2J2P51589 502 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 JAM2P57087 298 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 RPS6P62753 249 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ARID5AQ03989 594 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 COG2Q14746 738 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 TERF2Q15554 542 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 NOL9Q5SY16 702 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ALKBH5Q6P6C2 394 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ZNF771Q7L3S4 317 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 IRF2BP2Q7Z5L9 587 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 CREG2Q8IUH2 290 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 NOA1Q8NC60 698 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 NSUN6Q8TEA1 469 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 KIFAP3Q92845 792 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 FIZ1Q96SL8 496 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 PNKPQ96T60 521 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 STRA6Q9BX79 667 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 UBXN6Q9BZV1 441 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ABCB6Q9NP58 842 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 HOXC10Q9NYD6 342 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 ADAMTS1Q9UHI8 967 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 L1RE1Q9UN81 338 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 DIS3Q9Y2L1 958 aaKnown RBP8.29□□□□□ -1.08
CCDC171-205ENST00000472806 PCDHA10Q9Y5I2 948 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 GJA3Q9Y6H8 435 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 DUSP10Q9Y6W6 482 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 NFASCO94856 1347 aa8.29□□□□□ -1.08
CCDC171-205ENST00000472806 A0A087X0T9 212 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 DHX15O43143 795 aaKnown RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 SRGAP2O75044 1071 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 PALMO75781 387 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 PSAPP07602 524 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 FAM228BP0C875 321 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 PTPRAP18433 802 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 TNFRSF8P28908 595 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 OAS2P29728 719 aaKnown RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 NOP2P46087 812 aaKnown RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 CASP4P49662 377 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 VAMP7P51809 220 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 NCKAP1LP55160 1127 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 VSNL1P62760 191 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 TNNC1P63316 161 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 MRPS9P82933 396 aaKnown RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 GTF2BQ00403 316 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 PTK2Q05397 1052 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 SPP2Q13103 211 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 MAPK7Q13164 816 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 CBLBQ13191 982 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 DMP1Q13316 513 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 ITGB3BPQ13352 177 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 CASP8Q14790 479 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 RPS6KA1Q15418 735 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 TBC1D10BQ4KMP7 808 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 ZC2HC1CQ53FD0 456 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 XKR9Q5GH70 373 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 MUM1L1Q5H9M0 696 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 MEI1Q5TIA1 1274 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 C8orf74Q6P047 294 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 NSMFQ6X4W1 530 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 XXYLT1Q8NBI6 393 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 MCPH1Q8NEM0 835 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 SPATA4Q8NEY3 305 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 FAM71BQ8TC56 605 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 PKNOX2Q96KN3 472 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 TAAR1Q96RJ0 339 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 WRNIP1Q96S55 665 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 MOV10L1Q9BXT6 1211 aaKnown RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 TEX13BQ9BXU2 312 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 PDGFDQ9GZP0 370 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 INTS2Q9H0H0 1204 aaKnown RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 EPC1Q9H2F5 836 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 ACAD9Q9H845 621 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 SIX2Q9NPC8 291 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 HOMER2Q9NSB8 354 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 COL20A1Q9P218 1284 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-205ENST00000472806 APEX2Q9UBZ4 518 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 NAGPAQ9UK23 515 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 TFR2Q9UP52 801 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 BCS1LQ9Y276 419 aa8.28□□□□□ -1.08
CCDC171-205ENST00000472806 CCDC66A2RUB6 948 aa8.27□□□□□ -1.09
CCDC171-205ENST00000472806 FAM181BA6NEQ2 426 aa8.27□□□□□ -1.09
CCDC171-205ENST00000472806 F8VZ95 297 aa8.27□□□□□ -1.09
CCDC171-205ENST00000472806 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
CCDC171-205ENST00000472806 BUB1O43683 1085 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms