RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, human

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIC4-208	ENST00000472749	CCDC169	A6NNP5	214 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	BBOX1	O75936	387 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	HARS	P12081	509 aa	Known RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	NAT1	P18440	290 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ATP6V1C1	P21283	382 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	TNFAIP3	P21580	790 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	LRRC63	Q05C16	580 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	LRRC14	Q15048	493 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	MAP7D1	Q3KQU3	841 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	GLYCTK	Q8IVS8	523 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	CLMN	Q96JQ2	1002 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	AMN	Q9BXJ7	453 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	RANBP17	Q9H2T7	1088 aa	Known RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	METTL5	Q9NRN9	209 aa	Known RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	INTS9	Q9NV88	658 aa	Known RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	CTTNBP2NL	Q9P2B4	639 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	BCOR	Q6W2J9	1755 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	C5orf60	A6NFR6	353 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	CHRNA5	P30532	468 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	SSTR3	P32745	418 aa	Predicted RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	PPP1R2	P41236	205 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	SLCO1A2	P46721	670 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	RHBDL3	P58872	404 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	PTK2	Q05397	1052 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	CCDC92	Q53HC0	331 aa	Predicted RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	FOXB2	Q5VYV0	432 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	NANOGNB	Q7Z5D8	188 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	FAM178B	Q8IXR5	827 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ARHGAP18	Q8N392	663 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	REEP2	Q9BRK0	252 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	AMACR	Q9UHK6	382 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	FRMD4B	Q9Y2L6	1034 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ANKRD36C	Q5JPF3	1778 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749		A0A1W2PQJ5	194 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	DDTL	A6NHG4	134 aa	Predicted RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	PPP1R11	O60927	126 aa	Predicted RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	TMCC1	O94876	653 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	SERPING1	P05155	500 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ALOX15	P16050	662 aa	Predicted RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	PEX5	P50542	639 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	INHBC	P55103	352 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	COPS2	P61201	443 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	CELF4	Q9BZC1	486 aa	Known RBP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ETNK2	Q9NVF9	386 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ATP8A1	Q9Y2Q0	1164 aa		10.44	□□□□□ -0.74
ZIC4-208	ENST00000472749	ARHGEF35	A5YM69	484 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	LSM1	O15116	133 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	CALU	O43852	315 aa	Predicted RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	H2AFZ	P0C0S5	128 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	RPL13	P26373	211 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	PRKG1	Q13976	671 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	FIGN	Q5HY92	759 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	GPATCH4	Q5T3I0	446 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	KLHDC7A	Q5VTJ3	777 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	H2AFV	Q71UI9	128 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	CATSPER3	Q86XQ3	398 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	ANKS1A	Q92625	1134 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	FAM81B	Q96LP2	452 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	PURB	Q96QR8	312 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	RIC8A	Q9NPQ8	531 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	PVALEF	A0A1B0GWK0	134 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	AFP	P02771	609 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	GYS1	P13807	737 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	STAT1	P42224	750 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	KCNMA1	Q12791	1236 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	BIRC3	Q13489	604 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	LBR	Q14739	615 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	CERS5	Q8N5B7	392 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	BAP1	Q92560	729 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	ATP6V0A2	Q9Y487	856 aa		10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.43	□□□□□ -0.74
ZIC4-208	ENST00000472749	RAD51C	O43502	376 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	E2F6	O75461	281 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	PSMC4	P43686	418 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	PTDSS1	P48651	473 aa	Known RBP	10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	ERF	P50548	548 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	PPP4C	P60510	307 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	MESD	Q14696	234 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	SETDB1	Q15047	1291 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	AOC3	Q16853	763 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	NSMF	Q6X4W1	530 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	LRRC55	Q6ZSA7	311 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	CD302	Q8IX05	232 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	FAM186B	Q8IYM0	893 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	HAS1	Q92839	578 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	LRRC45	Q96CN5	670 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	BRD8	Q9H0E9	1235 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	NSRP1	Q9H0G5	558 aa	Known RBP	10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	RAB17	Q9H0T7	212 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	DHX36	Q9H2U1	1008 aa	Known RBP	10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	LRRC4C	Q9HCJ2	640 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	FAM114A2	Q9NRY5	505 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	LRP5	O75197	1615 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	UTRN	P46939	3433 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	GNA14	O95837	355 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	APBA3	O96018	575 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	NR3C1	P04150	777 aa		10.42	□□□□□ -0.74
ZIC4-208	ENST00000472749	ECE1	P42892	770 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms