RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 FUKQ8N0W3 1084 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 CPA6Q8N4T0 437 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 HOXB13Q92826 284 aaPredicted RBP7.53□□□□□ -1.2
CLK1-209ENST00000472679 PAWRQ96IZ0 340 aaKnown RBP7.53□□□□□ -1.2
CLK1-209ENST00000472679 ENKD1Q9H0I2 346 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 RBM12Q9NTZ6 932 aaKnown RBP7.53□□□□□ -1.2
CLK1-209ENST00000472679 IP6K2Q9UHH9 426 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 SERPINB13Q9UIV8 391 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 RCAN3Q9UKA8 241 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 ZBTB21Q9ULJ3 1066 aa7.53□□□□□ -1.2
CLK1-209ENST00000472679 G3BP2Q9UN86 482 aaKnown RBP7.53□□□□□ -1.2
CLK1-209ENST00000472679 ADCY6O43306 1168 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 STC2O76061 302 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 WNT3AP56704 352 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
CLK1-209ENST00000472679 DUSP2Q05923 314 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 MST1LQ2TV78 715 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 THEMISQ8N1K5 641 aaPredicted RBP7.52□□□□□ -1.21
CLK1-209ENST00000472679 CXorf38Q8TB03 319 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 JDP2Q8WYK2 163 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 RTFDC1Q9BY42 306 aaPredicted RBP7.52□□□□□ -1.21
CLK1-209ENST00000472679 KLHL42Q9P2K6 505 aa7.52□□□□□ -1.21
CLK1-209ENST00000472679 ZFR2Q9UPR6 939 aaKnown RBP7.52□□□□□ -1.21
CLK1-209ENST00000472679 ITGA10O75578 1167 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 ABLIM3O94929 683 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 EPHB1P54762 984 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 FOXL1Q12952 345 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 PIN1Q13526 163 aaPredicted RBP7.51□□□□□ -1.21
CLK1-209ENST00000472679 TMEM240Q5SV17 173 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.51□□□□□ -1.21
CLK1-209ENST00000472679 OR5M3Q8NGP4 307 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 ZNF480Q8WV37 535 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 NELFAQ9H3P2 528 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 PLA2G3Q9NZ20 509 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 GPRC5DQ9NZD1 345 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 TRPS1Q9UHF7 1281 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 INTUQ9ULD6 942 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 LIMCH1Q9UPQ0 1083 aa7.51□□□□□ -1.21
CLK1-209ENST00000472679 PATE3B3GLJ2 98 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 WNT10BO00744 389 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 RAD17O75943 681 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 EDNRBP24530 442 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 RPS19P39019 145 aaKnown RBP7.5□□□□□ -1.21
CLK1-209ENST00000472679 NPEPPSP55786 919 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 MGAT2Q10469 447 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 ICAM4Q14773 271 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 GRM7Q14831 915 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 FAM214AQ32MH5 1076 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 REPS2Q8NFH8 660 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 DNERQ8NFT8 737 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 RELTQ969Z4 430 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 COA7Q96BR5 231 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 TCF25Q9BQ70 676 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 RHOBTB2Q9BYZ6 727 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 SIK3Q9Y2K2 1263 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 IPPQ9Y573 584 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 EID1Q9Y6B2 187 aa7.5□□□□□ -1.21
CLK1-209ENST00000472679 NRP1O14786 923 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 FOXD2O60548 495 aaPredicted RBP7.49□□□□□ -1.21
CLK1-209ENST00000472679 PHF2O75151 1096 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 GYPEP15421 78 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 MSX2P35548 267 aaPredicted RBP7.49□□□□□ -1.21
CLK1-209ENST00000472679 WASP42768 502 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 SLC6A9P48067 706 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 PLP2Q04941 152 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 LRRC41Q15345 812 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 FAM111BQ6SJ93 734 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 FBXO18Q8NFZ0 1043 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 MDM1Q8TC05 714 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 Q8TCH9 128 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 MSL2Q9HCI7 577 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 TCF7L1Q9HCS4 588 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 ZIM2Q9NZV7 527 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 SLC30A1Q9Y6M5 507 aa7.49□□□□□ -1.21
CLK1-209ENST00000472679 ZMYM3Q14202 1370 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 HTRA2O43464 458 aaPredicted RBP7.48□□□□□ -1.21
CLK1-209ENST00000472679 ZSCAN20P17040 1043 aaPredicted RBP7.48□□□□□ -1.21
CLK1-209ENST00000472679 ECHS1P30084 290 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 ADKP55263 362 aaKnown RBP7.48□□□□□ -1.21
CLK1-209ENST00000472679 UAP1L1Q3KQV9 507 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 C3orf36Q3SXR2 165 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 PRAMEF14Q5SWL7 426 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 OR7D4Q8NG98 312 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLK1-209ENST00000472679 JPH3Q8WXH2 748 aaPredicted RBP7.48□□□□□ -1.21
CLK1-209ENST00000472679 HSPBAP1Q96EW2 488 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 LDAHQ9H6V9 325 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 CD248Q9HCU0 757 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 ZNF180Q9UJW8 692 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 SH3BP1Q9Y3L3 701 aa7.48□□□□□ -1.21
CLK1-209ENST00000472679 CCDC154A6NI56 674 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 IL33O95760 270 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 PF4V1P10720 104 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 CRHR1P34998 444 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 SREBF1P36956 1147 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 MRPL49Q13405 166 aaKnown RBP7.47□□□□□ -1.21
CLK1-209ENST00000472679 NFE2Q16621 373 aaPredicted RBP7.47□□□□□ -1.21
CLK1-209ENST00000472679 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
CLK1-209ENST00000472679 LILRA6Q6PI73 481 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms