RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RHPN2Q8IUC4 686 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 ZNF710Q8N1W2 664 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 SLC44A3Q8N4M1 653 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 SPRYD3Q8NCJ5 442 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 GPR152Q8TDT2 470 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 ATRIPQ8WXE1 791 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 SCLT1Q96NL6 688 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 MYADMQ96S97 322 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 ARHGEF3Q9NR81 526 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 MARCH5Q9NX47 278 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 MIOSQ9NXC5 875 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 VPS54Q9P1Q0 977 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 SUCLA2Q9P2R7 463 aaPredicted RBP10.48□□□□□ -0.73
VCL-204ENST00000472585 WRAP73Q9P2S5 460 aaPredicted RBP10.48□□□□□ -0.73
VCL-204ENST00000472585 USP18Q9UMW8 372 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 PIN4Q9Y237 131 aaKnown RBP10.48□□□□□ -0.73
VCL-204ENST00000472585 PCDHB2Q9Y5E7 798 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 FAM208BQ5VWN6 2430 aa10.48□□□□□ -0.73
VCL-204ENST00000472585 DOCK8Q8NF50 2099 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 M0R2N6 131 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 EML1O00423 815 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 NRP1O14786 923 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 GAS7O60861 476 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 RFPL2O75678 378 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 TDP2O95551 362 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 POMCP01189 267 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 SPATA31D3P0C874 917 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 USP11P51784 963 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 RCAN1P53805 252 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 NPEPPSP55786 919 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 RNASELQ05823 741 aaKnown RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 NPY5RQ15761 445 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 ZNF528Q3MIS6 628 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 Q4G0T1 1027 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 XKR3Q5GH77 459 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 LRCH2Q5VUJ6 765 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 PLA2G4FQ68DD2 849 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 DCLRE1AQ6PJP8 1040 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 GLB1LQ6UWU2 654 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 SPATA31D4Q6ZUB0 917 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 SMG8Q8ND04 991 aaKnown RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 TBCKQ8TEA7 893 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 KCNB2Q92953 911 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 BRF1Q92994 677 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 ZNF707Q96C28 371 aaPredicted RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 SHDQ96IW2 340 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 NCOA5Q9HCD5 579 aaKnown RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 SPATA6Q9NWH7 488 aaPredicted RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 DLGAP2Q9P1A6 1054 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 STK39Q9UEW8 545 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 DPP7Q9UHL4 492 aa10.47□□□□□ -0.73
VCL-204ENST00000472585 NAP1L2Q9ULW6 460 aaPredicted RBP10.47□□□□□ -0.73
VCL-204ENST00000472585 CYP3A7-CYP3A51PA0A087WV96 503 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 CCDC195A0A1B0GUA6 201 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 DDX11L8A8MPP1 907 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 C2CD2LO14523 706 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 ZBTB39O15060 712 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 TEX28O15482 410 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 ADRB1P08588 477 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 GLULP15104 373 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 CYP3A7P24462 503 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 GNA11P29992 359 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 SFNP31947 248 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 JAK3P52333 1124 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 TMEM92Q6UXU6 159 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 CATSPER4Q7RTX7 472 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 MIER3Q7Z3K6 550 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 ZNF410Q86VK4 478 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 COLGALT2Q8IYK4 626 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 RNF168Q8IYW5 571 aaPredicted RBP10.46□□□□□ -0.73
VCL-204ENST00000472585 PJA1Q8NG27 643 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 ETNPPLQ8TBG4 499 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 RSPH1Q8WYR4 309 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 B3GALT6Q96L58 329 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 NLRP4Q96MN2 994 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 MBOAT7Q96N66 472 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 RPP25Q9BUL9 199 aaKnown RBP10.46□□□□□ -0.73
VCL-204ENST00000472585 TEKT3Q9BXF9 490 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 AGXT2Q9BYV1 514 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 BCO2Q9BYV7 579 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 EPS15L1Q9UBC2 864 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 FBXO4Q9UKT5 387 aa10.46□□□□□ -0.73
VCL-204ENST00000472585 NID2Q14112 1375 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 CLUHO75153 1309 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 POTEMA6NI47 508 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 LRRN2O75325 713 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 PAPLNO95428 1278 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 ALDH2P05091 517 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 SFPQP23246 707 aaKnown RBP eCLIP10.45□□□□□ -0.74
VCL-204ENST00000472585 CSTF1Q05048 431 aaKnown RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 RNF20Q5VTR2 975 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 CYP26C1Q6V0L0 522 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 MAML2Q8IZL2 1156 aaPredicted RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 CMASQ8NFW8 434 aaPredicted RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
VCL-204ENST00000472585 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 AIFM3Q96NN9 605 aa10.45□□□□□ -0.74
VCL-204ENST00000472585 RPS6KC1Q96S38 1066 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms