RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 IPPQ9Y573 584 aa15.62■□□□□ 0.09
BRCA1-211ENST00000472490 A0A1W2PQ27 194 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 A0A1W2PQ64 194 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 A0A1W2PQD8 194 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 MYMKA6NI61 221 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 GTPBP6O43824 516 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-211ENST00000472490 MAPTP10636 758 aaKnown RBP15.61■□□□□ 0.09
BRCA1-211ENST00000472490 FOSL2P15408 326 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 ATF7P17544 494 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-211ENST00000472490 BMPR1AP36894 532 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 E2F4Q16254 413 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 DCAF4L1Q3SXM0 396 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 EPC2Q52LR7 807 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 HAUS6Q7Z4H7 955 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 CCDC65Q8IXS2 484 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 URGCPQ8TCY9 931 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 CCDC34Q96HJ3 373 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 GUCD1Q96NT3 240 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 CASD1Q96PB1 797 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 C17orf80Q9BSJ5 609 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 RSAD1Q9HA92 442 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 TNFSF13BQ9Y275 285 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 PCDHB12Q9Y5F1 795 aa15.61■□□□□ 0.09
BRCA1-211ENST00000472490 MRPL42Q9Y6G3 142 aaKnown RBP15.61■□□□□ 0.09
BRCA1-211ENST00000472490 C5orf67F2Z3F1 127 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 K7ENM7 598 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 ARHGEF15O94989 841 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 NPTXRO95502 500 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 SLFN14P0C7P3 912 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 IDEP14735 1019 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 PFKFB1P16118 471 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 LAG3P18627 525 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 CTNNB1P35222 781 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 SYKP43405 635 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 NOMO2Q5JPE7 1267 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 CLLU1OSQ5K130 101 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 ZPBP2Q6X784 338 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 HELQQ8TDG4 1101 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 TCHPQ9BT92 498 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 EIF2AQ9BY44 585 aaKnown RBP15.6■□□□□ 0.09
BRCA1-211ENST00000472490 PDZD7Q9H5P4 517 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 TYW1Q9NV66 732 aaKnown RBP15.6■□□□□ 0.09
BRCA1-211ENST00000472490 GIT1Q9Y2X7 761 aa15.6■□□□□ 0.09
BRCA1-211ENST00000472490 H3BNC9 293 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 OFD1O75665 1012 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 TOM1L1O75674 476 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 IGFBP4P22692 258 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 GATMP50440 423 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 RNASELQ05823 741 aaKnown RBP15.59■□□□□ 0.09
BRCA1-211ENST00000472490 ALCAMQ13740 583 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 PTPROQ16827 1216 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 LONRF3Q496Y0 759 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 HERC4Q5GLZ8 1057 aaPredicted RBP15.59■□□□□ 0.09
BRCA1-211ENST00000472490 NT5DC1Q5TFE4 455 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 CNNM4Q6P4Q7 775 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 AGMOQ6ZNB7 445 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 SMG8Q8ND04 991 aaKnown RBP15.59■□□□□ 0.09
BRCA1-211ENST00000472490 MYLIPQ8WY64 445 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 MRPS27Q92552 414 aaKnown RBP15.59■□□□□ 0.09
BRCA1-211ENST00000472490 LPPQ93052 612 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 P2RX5Q93086 422 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 DNAJC19Q96DA6 116 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 BICD1Q96G01 975 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 CHAMP1Q96JM3 812 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 ACO2Q99798 780 aaKnown RBP15.59■□□□□ 0.09
BRCA1-211ENST00000472490 ST6GALNAC4Q9H4F1 302 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 MRPL44Q9H9J2 332 aaKnown RBP15.59■□□□□ 0.09
BRCA1-211ENST00000472490 GDPD2Q9HCC8 539 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 OLFML3Q9NRN5 406 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 PANK4Q9NVE7 773 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 LMCD1Q9NZU5 365 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 ZMYM2Q9UBW7 1377 aa15.59■□□□□ 0.09
BRCA1-211ENST00000472490 MYH15Q9Y2K3 1946 aa15.58■□□□□ 0.09
BRCA1-211ENST00000472490 FAM237AA0A1B0GTK4 181 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 A0A1B0GVL5 298 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 MYL1P05976 194 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 ALDH7A1P49419 539 aaKnown RBP15.58■□□□□ 0.08
BRCA1-211ENST00000472490 GTF2BQ00403 316 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 ZNF568Q3ZCX4 644 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 CDR2LQ86X02 465 aaPredicted RBP15.58■□□□□ 0.08
BRCA1-211ENST00000472490 SFR1Q86XK3 245 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 HVCN1Q96D96 273 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 FAM193BQ96PV7 902 aaPredicted RBP15.58■□□□□ 0.08
BRCA1-211ENST00000472490 C7orf25Q9BPX7 421 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 TARS2Q9BW92 718 aaKnown RBP15.58■□□□□ 0.08
BRCA1-211ENST00000472490 TRIM9Q9C026 710 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 NXF3Q9H4D5 531 aaKnown RBP15.58■□□□□ 0.08
BRCA1-211ENST00000472490 RNF19AQ9NV58 838 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 PARP2Q9UGN5 583 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 TBX20Q9UMR3 447 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 EXOC7Q9UPT5 735 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 HPSEQ9Y251 543 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 INPP5FQ9Y2H2 1132 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 HES2Q9Y543 173 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 PCDHB13Q9Y5F0 798 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 TTC3P53804 2025 aa15.58■□□□□ 0.08
BRCA1-211ENST00000472490 FRMD3A2A2Y4 597 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms