RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PALB2Q86YC2 1186 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 COLGALT2Q8IYK4 626 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 ZBTB44Q8NCP5 570 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 SLC5A5Q92911 643 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 SH2D3AQ9BRG2 576 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 RTKNQ9BST9 563 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 IFT122Q9HBG6 1241 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 C6orf50Q9HD87 102 aa21.34■■□□□ 1.01
SORT1-203ENST00000471996 TGM5O43548 720 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 CDC27P30260 824 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 PRKCQQ04759 706 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 ST3GAL2Q16842 350 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 UBXN11Q5T124 520 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 RDM1Q8NG50 284 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 FGF14Q92915 247 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 TEKT3Q9BXF9 490 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 OSBPL6Q9BZF3 934 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 EPC1Q9H2F5 836 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 CHST7Q9NS84 486 aa21.33■■□□□ 1.01
SORT1-203ENST00000471996 SMG5Q9UPR3 1016 aaKnown RBP21.33■■□□□ 1.01
SORT1-203ENST00000471996 DOCK8Q8NF50 2099 aa21.33■■□□□ 1
SORT1-203ENST00000471996 DCDC2BA2VCK2 349 aa21.32■■□□□ 1
SORT1-203ENST00000471996 GOLGA8AA7E2F4 631 aa21.32■■□□□ 1
SORT1-203ENST00000471996 GOLGA8BA8MQT2 603 aa21.32■■□□□ 1
SORT1-203ENST00000471996 MAGEA9P43362 315 aa21.32■■□□□ 1
SORT1-203ENST00000471996 MLF2Q15773 248 aaPredicted RBP21.32■■□□□ 1
SORT1-203ENST00000471996 LRCH2Q5VUJ6 765 aa21.32■■□□□ 1
SORT1-203ENST00000471996 LILRA6Q6PI73 481 aa21.32■■□□□ 1
SORT1-203ENST00000471996 PARM1Q6UWI2 310 aa21.32■■□□□ 1
SORT1-203ENST00000471996 CCDC12Q8WUD4 166 aaPredicted RBP21.32■■□□□ 1
SORT1-203ENST00000471996 UBN1Q9NPG3 1134 aa21.32■■□□□ 1
SORT1-203ENST00000471996 ZSCAN32Q9NX65 697 aa21.32■■□□□ 1
SORT1-203ENST00000471996 MTF2Q9Y483 593 aaPredicted RBP21.32■■□□□ 1
SORT1-203ENST00000471996 SPTBN2O15020 2390 aa21.32■■□□□ 1
SORT1-203ENST00000471996 EDIL3O43854 480 aa21.31■■□□□ 1
SORT1-203ENST00000471996 LILRB5O75023 590 aa21.31■■□□□ 1
SORT1-203ENST00000471996 NCLP19338 710 aaKnown RBP21.31■■□□□ 1
SORT1-203ENST00000471996 TGM1P22735 817 aa21.31■■□□□ 1
SORT1-203ENST00000471996 FSHRP23945 695 aa21.31■■□□□ 1
SORT1-203ENST00000471996 GNA11P29992 359 aa21.31■■□□□ 1
SORT1-203ENST00000471996 HOXA11P31270 313 aaPredicted RBP21.31■■□□□ 1
SORT1-203ENST00000471996 DSC1Q08554 894 aa21.31■■□□□ 1
SORT1-203ENST00000471996 UBXN2BQ14CS0 331 aa21.31■■□□□ 1
SORT1-203ENST00000471996 SLC44A4Q53GD3 710 aa21.31■■□□□ 1
SORT1-203ENST00000471996 MIER3Q7Z3K6 550 aa21.31■■□□□ 1
SORT1-203ENST00000471996 NELL1Q92832 810 aa21.31■■□□□ 1
SORT1-203ENST00000471996 CCDC136Q96JN2 1154 aa21.31■■□□□ 1
SORT1-203ENST00000471996 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.31■■□□□ 1
SORT1-203ENST00000471996 FAM170BA6NMN3 283 aa21.3■■□□□ 1
SORT1-203ENST00000471996 ADRB1P08588 477 aa21.3■■□□□ 1
SORT1-203ENST00000471996 EXOSC10Q01780 885 aaKnown RBP21.3■■□□□ 1
SORT1-203ENST00000471996 RSPO2Q6UXX9 243 aaPredicted RBP21.3■■□□□ 1
SORT1-203ENST00000471996 GPR65Q8IYL9 337 aa21.3■■□□□ 1
SORT1-203ENST00000471996 CNNM3Q8NE01 707 aa21.3■■□□□ 1
SORT1-203ENST00000471996 GJA10Q969M2 543 aa21.3■■□□□ 1
SORT1-203ENST00000471996 JPH2Q9BR39 696 aaPredicted RBP21.3■■□□□ 1
SORT1-203ENST00000471996 FNIP2Q9P278 1114 aa21.3■■□□□ 1
SORT1-203ENST00000471996 CDH7Q9ULB5 785 aa21.3■■□□□ 1
SORT1-203ENST00000471996 USP18Q9UMW8 372 aa21.3■■□□□ 1
SORT1-203ENST00000471996 DDX11L8A8MPP1 907 aa21.29■■□□□ 1
SORT1-203ENST00000471996 F8W810 466 aa21.29■■□□□ 1
SORT1-203ENST00000471996 TBC1D4O60343 1298 aa21.29■■□□□ 1
SORT1-203ENST00000471996 ZMYND10O75800 440 aa21.29■■□□□ 1
SORT1-203ENST00000471996 PSMD10O75832 226 aa21.29■■□□□ 1
SORT1-203ENST00000471996 SRGAP1Q7Z6B7 1085 aa21.29■■□□□ 1
SORT1-203ENST00000471996 SMG8Q8ND04 991 aaKnown RBP21.29■■□□□ 1
SORT1-203ENST00000471996 B3GALT6Q96L58 329 aa21.29■■□□□ 1
SORT1-203ENST00000471996 TCEANC2Q96MN5 208 aa21.29■■□□□ 1
SORT1-203ENST00000471996 MINDY3Q9H8M7 445 aa21.29■■□□□ 1
SORT1-203ENST00000471996 LTB4R2Q9NPC1 389 aa21.29■■□□□ 1
SORT1-203ENST00000471996 COL4A3BPQ9Y5P4 624 aa21.29■■□□□ 1
SORT1-203ENST00000471996 KLF18A0A0U1RQI7 1052 aa21.28■■□□□ 1
SORT1-203ENST00000471996 ARL5CA6NH57 179 aa21.28■■□□□ 1
SORT1-203ENST00000471996 NR1I2O75469 434 aa21.28■■□□□ 1
SORT1-203ENST00000471996 ITGA4P13612 1032 aa21.28■■□□□ 1
SORT1-203ENST00000471996 ADD1P35611 737 aaKnown RBP21.28■■□□□ 1
SORT1-203ENST00000471996 USP11P51784 963 aa21.28■■□□□ 1
SORT1-203ENST00000471996 RCAN1P53805 252 aa21.28■■□□□ 1
SORT1-203ENST00000471996 USP41Q3LFD5 358 aa21.28■■□□□ 1
SORT1-203ENST00000471996 B3GNT9Q6UX72 402 aa21.28■■□□□ 1
SORT1-203ENST00000471996 ANO5Q75V66 913 aa21.28■■□□□ 1
SORT1-203ENST00000471996 MTSS1LQ765P7 747 aa21.28■■□□□ 1
SORT1-203ENST00000471996 GRASPQ7Z6J2 395 aaPredicted RBP21.28■■□□□ 1
SORT1-203ENST00000471996 GLYCTKQ8IVS8 523 aa21.28■■□□□ 1
SORT1-203ENST00000471996 BICD2Q8TD16 824 aa21.28■■□□□ 1
SORT1-203ENST00000471996 MBOAT7Q96N66 472 aa21.28■■□□□ 1
SORT1-203ENST00000471996 GAD1Q99259 594 aa21.28■■□□□ 1
SORT1-203ENST00000471996 COLEC11Q9BWP8 271 aa21.28■■□□□ 1
SORT1-203ENST00000471996 MIOSQ9NXC5 875 aa21.28■■□□□ 1
SORT1-203ENST00000471996 PFKPQ01813 784 aa21.27■■□□□ 1
SORT1-203ENST00000471996 ZBTB41Q5SVQ8 909 aa21.27■■□□□ 1
SORT1-203ENST00000471996 DHX32Q7L7V1 743 aaKnown RBP21.27■■□□□ 1
SORT1-203ENST00000471996 CLDN23Q96B33 292 aa21.27■■□□□ 1
SORT1-203ENST00000471996 GPR62Q9BZJ7 368 aa21.27■■□□□ 1
SORT1-203ENST00000471996 RNF39Q9H2S5 420 aa21.27■■□□□ 1
SORT1-203ENST00000471996 PARD6AQ9NPB6 346 aa21.27■■□□□ 1
SORT1-203ENST00000471996 IPPQ9Y573 584 aa21.27■■□□□ 1
SORT1-203ENST00000471996 WDR81Q562E7 1941 aa21.27■■□□□ 1
SORT1-203ENST00000471996 COL4A3Q01955 1670 aa21.26■□□□□ 0.99
SORT1-203ENST00000471996 SRGAP2CP0DJJ0 459 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms