RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 LDHAP00338 332 aaKnown RBP14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 KIZQ2M2Z5 673 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 HIBCHQ6NVY1 386 aaPredicted RBP14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 EFHBQ8N7U6 833 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 PBKQ96KB5 322 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CDC23Q9UJX2 597 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 C11orf70Q9BRQ4 267 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 MAGEF1Q9HAY2 307 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 GALNT8Q9NY28 637 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 CNTRLQ7Z7A1 2325 aa14.02□□□□□ -0.16
NPHP3-ACAD11-201ENST00000471702 ZNF197O14709 1029 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NLRP11P59045 1033 aaKnown RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KRT72Q14CN4 511 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 APPL2Q8NEU8 664 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ASCC2Q9H1I8 757 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RPAP3Q9H6T3 665 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RAPGEF6Q8TEU7 1601 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 IKBKBO14920 756 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GNA15P30679 374 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ATXN3P54252 364 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 OCA2Q04671 838 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 UBE3CQ15386 1083 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SGO1Q5FBB7 561 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 OR9Q1Q8NGQ5 310 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ADGRA2Q96PE1 1338 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 E2F8A0AVK6 867 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GABPB1Q06547 395 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 OR6J1Q8NGC5 347 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 INPP5DQ92835 1189 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PGBD4Q96DM1 585 aa14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SEPT5Q99719 369 aaPredicted RBP14.02□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 C6orf222P0C671 652 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 IL31Q6EBC2 164 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SPATA2LQ8IUW3 424 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NEK9Q8TD19 979 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF512Q96ME7 567 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 LATS2Q9NRM7 1088 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARHGAP26Q9UNA1 814 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PRG3Q9Y2Y8 225 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PLEKHA8P1O95397 391 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RALAP11233 206 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 CASP1P29466 404 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ADD2P35612 726 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SPARCL1Q14515 664 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NAALADL2Q58DX5 795 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MMS22LQ6ZRQ5 1243 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SPATS2Q86XZ4 545 aaKnown RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TRIM33Q9UPN9 1127 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 USP17L5A8MUK1 530 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF211Q13398 564 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ALKBH5Q6P6C2 394 aaKnown RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TBC1D1Q86TI0 1168 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 GIMAP8Q8ND71 665 aaPredicted RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 USE1Q9NZ43 259 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 HSPBP1Q9NZL4 362 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 hCG_2014768A0A024R1R8 64 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 A0A1B0GW55 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4L2P0CJ85 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4L3P0CJ86 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4L4P0CJ87 422 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4L5P0CJ88 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4L6P0CJ89 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4L7P0CJ90 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SDC4P31431 198 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARL8AQ96BM9 186 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DUX4Q9UBX2 424 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ATP10DQ9P241 1426 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TM6SF1Q9BZW5 370 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ALG13Q9NP73 1137 aaKnown RBP14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 SNX24Q9Y343 169 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 RNF123Q5XPI4 1314 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PDGFRBP09619 1106 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 HMOX2P30519 316 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ARL4CP56559 192 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MED21Q13503 144 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 C6orf10Q5SRN2 563 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KLHL11Q9NVR0 708 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 DNAJC12Q9UKB3 198 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 C5orf58C9J3I9 102 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KBTBD13C9JR72 458 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PALMO75781 387 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MMP1P03956 469 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ENAHQ8N8S7 591 aaPredicted RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 NDST4Q9H3R1 872 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ANKRD65E5RJM6 399 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 MDM2Q00987 491 aaPredicted RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 EFHC2Q5JST6 749 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TMEM35BQ8NCS4 154 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ZNF280CQ8ND82 737 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PRAG1Q86YV5 1406 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 STXBP3O00186 592 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 IPO5O00410 1097 aaKnown RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 ADCY3O60266 1144 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 KRT4P19013 534 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 TNFAIP2Q03169 654 aa14□□□□□ -0.17
NPHP3-ACAD11-201ENST00000471702 PID1Q7Z2X4 250 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms