RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 HIPK3Q9H422 1215 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 TMEM39AQ9NV64 488 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 TBX21Q9UL17 535 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 ST3GAL5Q9UNP4 418 aa21.02■□□□□ 0.96
PSPC1-203ENST00000471658 BECN2A8MW95 431 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 NR3C1P04150 777 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CLTBP09497 229 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CD52P31358 61 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CYP2C18P33260 490 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CYP2J2P51589 502 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CCL23P55773 120 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 ADAM9Q13443 819 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 GPNMBQ14956 572 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 TPD52L1Q16890 204 aaPredicted RBP21.01■□□□□ 0.95
PSPC1-203ENST00000471658 ATF7IP2Q5U623 682 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 ZPBP2Q6X784 338 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 ZBTB33Q86T24 672 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CSGALNACT2Q8N6G5 542 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CCDC155Q8N6L0 562 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 DMAC2Q9NW81 257 aa21.01■□□□□ 0.95
PSPC1-203ENST00000471658 CNTNAP2Q9UHC6 1331 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 SMTNL1A8MU46 457 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 ABLIM1O14639 778 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 IKBKBO14920 756 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 SFPQP23246 707 aaKnown RBP eCLIP21■□□□□ 0.951e-7■□□□□ 8.6
PSPC1-203ENST00000471658 NFX1Q12986 1120 aaKnown RBP21■□□□□ 0.95
PSPC1-203ENST00000471658 ARMCX5Q6P1M9 558 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 LRRC55Q6ZSA7 311 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 TSHZ1Q6ZSZ6 1077 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 SCLYQ96I15 445 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 PRIMPOLQ96LW4 560 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 WNT8AQ9H1J5 351 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 PDZD7Q9H5P4 517 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 PTPRHQ9HD43 1115 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 ANKFY1Q9P2R3 1169 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 TRIM43BA6NCK2 446 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 HARSP12081 509 aaKnown RBP21■□□□□ 0.95
PSPC1-203ENST00000471658 NR2F2P24468 414 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 CASP4P49662 377 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 EDRF1Q3B7T1 1238 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 IRF2BP1Q8IU81 584 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 POMGNT1Q8WZA1 660 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 TRIM43Q96BQ3 446 aaPredicted RBP21■□□□□ 0.95
PSPC1-203ENST00000471658 TCHPQ9BT92 498 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 ERVK-5Q9HDB9 667 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 PADI3Q9ULW8 664 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 TNFSF13BQ9Y275 285 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 STYXL1Q9Y6J8 313 aa21■□□□□ 0.95
PSPC1-203ENST00000471658 GOLGA8IPA6NC78 632 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 GOLGA8JA6NMD2 632 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 PITPNM1O00562 1244 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 NBNO60934 754 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 TOM1L1O75674 476 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 PROZP22891 400 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 MATR3P43243 847 aaKnown RBP eCLIP20.99■□□□□ 0.953e-6■■□□□ 12.9
PSPC1-203ENST00000471658 FKBP3Q00688 224 aaKnown RBP20.99■□□□□ 0.95
PSPC1-203ENST00000471658 SEZ6Q53EL9 994 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 ZC3H3Q8IXZ2 948 aaKnown RBP20.99■□□□□ 0.95
PSPC1-203ENST00000471658 GOLGA5Q8TBA6 731 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 NOC3LQ8WTT2 800 aaKnown RBP20.99■□□□□ 0.95
PSPC1-203ENST00000471658 SAAL1Q96ER3 474 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 PRDM5Q9NQX1 630 aaPredicted RBP20.99■□□□□ 0.95
PSPC1-203ENST00000471658 AGPAT5Q9NUQ2 364 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 HSPBP1Q9NZL4 362 aa20.99■□□□□ 0.95
PSPC1-203ENST00000471658 PIN4Q9Y237 131 aaKnown RBP20.99■□□□□ 0.95
PSPC1-203ENST00000471658 A0A1B0GUA9 196 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 CLDN3O15551 220 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 ITGB8P26012 769 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 SNRPFP62306 86 aaKnown RBP20.98■□□□□ 0.95
PSPC1-203ENST00000471658 NFIL3Q16649 462 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 ZBTB41Q5SVQ8 909 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 FOXR2Q6PJQ5 311 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 MPZL3Q6UWV2 235 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 C12orf56Q8IXR9 622 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 TNS4Q8IZW8 715 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 RDH13Q8NBN7 331 aa20.98■□□□□ 0.95
PSPC1-203ENST00000471658 A0A0B4J269 797 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 CETN3O15182 167 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 GPR182O15218 404 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 GARTP22102 1010 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 PAK2Q13177 524 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 ZNF568Q3ZCX4 644 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 CEP135Q66GS9 1140 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 SLC9A9Q8IVB4 645 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 EIF2AQ9BY44 585 aaKnown RBP20.97■□□□□ 0.95
PSPC1-203ENST00000471658 CDT1Q9H211 546 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 TMX1Q9H3N1 280 aa20.97■□□□□ 0.95
PSPC1-203ENST00000471658 CGNQ9P2M7 1197 aaKnown RBP20.97■□□□□ 0.95
PSPC1-203ENST00000471658 GOLGA6L19H0YKK7 550 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 AKAP3O75969 853 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 ATP1A3P13637 1013 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 MCL1Q07820 350 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 NCBP1Q09161 790 aaKnown RBP20.96■□□□□ 0.95
PSPC1-203ENST00000471658 PCBP1Q15365 356 aaKnown RBP eCLIP20.96■□□□□ 0.95
PSPC1-203ENST00000471658 CDKAL1Q5VV42 579 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 SLFN12LQ6IEE8 588 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 CREBRFQ8IUR6 639 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 CEP120Q8N960 986 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 MSTO1Q9BUK6 570 aa20.96■□□□□ 0.95
PSPC1-203ENST00000471658 AGO2Q9UKV8 859 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms