RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 C1QL3Q5VWW1 255 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 DOK3Q7L591 496 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 KRT26Q7Z3Y9 468 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 STRA8Q7Z7C7 330 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 ZFPM1Q8IX07 1006 aa7.75□□□□□ -1.17
CCDC39-202ENST00000471307 MSL3Q8N5Y2 521 aaKnown RBP7.75□□□□□ -1.17
CCDC39-202ENST00000471307 GLB1L3Q8NCI6 653 aaPredicted RBP7.75□□□□□ -1.17
CCDC39-202ENST00000471307 CASRP41180 1078 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 GZMKP49863 264 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 UBE3CQ15386 1083 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 CT83Q5H943 113 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 GJC2Q5T442 439 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-202ENST00000471307 UBR7Q8N806 425 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 ZNF483Q8TF39 744 aaPredicted RBP7.74□□□□□ -1.17
CCDC39-202ENST00000471307 SNX33Q8WV41 574 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 CLCA2Q9UQC9 943 aa7.74□□□□□ -1.17
CCDC39-202ENST00000471307 STC2O76061 302 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 GASTP01350 101 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 LPLP06858 475 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 HMGA2P52926 109 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 LGALS4P56470 323 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 FNDC7Q5VTL7 733 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 MB21D1Q8N884 522 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 EPC1Q9H2F5 836 aa7.73□□□□□ -1.17
CCDC39-202ENST00000471307 DNAJC6O75061 913 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 TMEM127O75204 238 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 MTHFD2P13995 350 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 MRPS9P82933 396 aaKnown RBP7.72□□□□□ -1.17
CCDC39-202ENST00000471307 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCDC39-202ENST00000471307 RABL3Q5HYI8 236 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 EAF2Q96CJ1 260 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-202ENST00000471307 ORAI2Q96SN7 254 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 CPPED1Q9BRF8 314 aaPredicted RBP7.72□□□□□ -1.17
CCDC39-202ENST00000471307 MRIQ9BWK5 157 aa7.72□□□□□ -1.17
CCDC39-202ENST00000471307 PHF2O75151 1096 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 PPFIA4O75335 1185 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 EYA4O95677 639 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 ADH4P08319 380 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 PTGS2P35354 604 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 PURAQ00577 322 aaKnown RBP7.71□□□□□ -1.18
CCDC39-202ENST00000471307 KLF10Q13118 480 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 IQSEC1Q6DN90 963 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 OR52N2Q8NGI0 321 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 TRPS1Q9UHF7 1281 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 BICRAQ9NZM4 1560 aa7.71□□□□□ -1.18
CCDC39-202ENST00000471307 GRXCR1A8MXD5 290 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 TRIM24O15164 1050 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 PRAMEF4O60810 478 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 CTSSP25774 331 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 SLC25A3Q00325 362 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 FHL2Q14192 279 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 STAT4Q14765 748 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 FAM214AQ32MH5 1076 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 LMBR1Q8WVP7 490 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 AUTS2Q8WXX7 1259 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 CDC5LQ99459 802 aaKnown RBP7.7□□□□□ -1.18
CCDC39-202ENST00000471307 MMRN2Q9H8L6 949 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCDC39-202ENST00000471307 HDAC5Q9UQL6 1122 aa7.7□□□□□ -1.18
CCDC39-202ENST00000471307 RECQL4O94761 1208 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 CRHR1P34998 444 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 ANO4Q32M45 955 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 EGFLAMQ63HQ2 1017 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 ABHD15Q6UXT9 468 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 PDZD4Q76G19 769 aaPredicted RBP7.69□□□□□ -1.18
CCDC39-202ENST00000471307 ZNF480Q8WV37 535 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 PGBD4Q96DM1 585 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 RPTORQ8N122 1335 aa7.69□□□□□ -1.18
CCDC39-202ENST00000471307 B5MCH6 92 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 ITGA10O75578 1167 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 CFBP00751 764 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
CCDC39-202ENST00000471307 HK1P19367 917 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 TGFB2P61812 414 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 APBA1Q02410 837 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 VPS72Q15906 364 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 FAM180AQ6UWF9 173 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 GPRIN1Q7Z2K8 1008 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 SPATS2Q86XZ4 545 aaKnown RBP7.68□□□□□ -1.18
CCDC39-202ENST00000471307 SLC25A43Q8WUT9 341 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-202ENST00000471307 LSM14BQ9BX40 385 aaKnown RBP7.68□□□□□ -1.18
CCDC39-202ENST00000471307 TRIM8Q9BZR9 551 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 GPRC5DQ9NZD1 345 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 DPP7Q9UHL4 492 aa7.68□□□□□ -1.18
CCDC39-202ENST00000471307 ING1Q9UK53 422 aaPredicted RBP7.68□□□□□ -1.18
CCDC39-202ENST00000471307 REXO2Q9Y3B8 237 aaKnown RBP7.68□□□□□ -1.18
CCDC39-202ENST00000471307 GOLGA8AA7E2F4 631 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 GPR39O43194 453 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 CNGA1P29973 690 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 TMPRSS15P98073 1019 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 DPTQ07507 201 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 RNF219Q5W0B1 726 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-202ENST00000471307 DRICH1Q6PGQ1 229 aaPredicted RBP7.67□□□□□ -1.18
CCDC39-202ENST00000471307 BTNL9Q6UXG8 535 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 ZNF276Q8N554 614 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 WDR66Q8TBY9 1149 aa7.67□□□□□ -1.18
CCDC39-202ENST00000471307 HAS1Q92839 578 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms