RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SFR1Q86XK3 245 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 SMG8Q8ND04 991 aaKnown RBP21.74■■□□□ 1.07
HDAC7-220ENST00000471235 HELQQ8TDG4 1101 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 FIZ1Q96SL8 496 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 C17orf80Q9BSJ5 609 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 TMEM117Q9H0C3 514 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 MAGEF1Q9HAY2 307 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 KCNG1Q9UIX4 513 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 IPPQ9Y573 584 aa21.74■■□□□ 1.07
HDAC7-220ENST00000471235 FAM237AA0A1B0GTK4 181 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 TPRNQ4KMQ1 711 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 EEF1DP3Q658K8 133 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 FSIP1Q8NA03 581 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 ARNTL2Q8WYA1 636 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 KCNN1Q92952 543 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 CASD1Q96PB1 797 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 PYM1Q9BRP8 204 aaKnown RBP21.73■■□□□ 1.07
HDAC7-220ENST00000471235 GOLPH3LQ9H4A5 285 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 NXF3Q9H4D5 531 aaKnown RBP21.73■■□□□ 1.07
HDAC7-220ENST00000471235 PRDM12Q9H4Q4 367 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 HCSTQ9UBK5 93 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 MTUS1Q9ULD2 1270 aa21.73■■□□□ 1.07
HDAC7-220ENST00000471235 FRMD3A2A2Y4 597 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 ACTN4O43707 911 aaKnown RBP21.72■■□□□ 1.07
HDAC7-220ENST00000471235 TRAK2O60296 914 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 ATF7IP2Q5U623 682 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 AGMOQ6ZNB7 445 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 HAUS6Q7Z4H7 955 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 ABI1Q8IZP0 508 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 MRPS27Q92552 414 aaKnown RBP21.72■■□□□ 1.07
HDAC7-220ENST00000471235 CLP1Q92989 425 aaKnown RBP21.72■■□□□ 1.07
HDAC7-220ENST00000471235 PGBD4Q96DM1 585 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 MRPL4Q9BYD3 311 aaKnown RBP21.72■■□□□ 1.07
HDAC7-220ENST00000471235 TRIM6Q9C030 488 aaPredicted RBP21.72■■□□□ 1.07
HDAC7-220ENST00000471235 SERTAD1Q9UHV2 236 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 HES2Q9Y543 173 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 TRANK1O15050 2925 aa21.72■■□□□ 1.07
HDAC7-220ENST00000471235 H0YCG3 227 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 IDEP14735 1019 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 GAP43P17677 238 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 NMT1P30419 496 aaKnown RBP21.71■■□□□ 1.07
HDAC7-220ENST00000471235 NDUFA8P51970 172 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 STRN3Q13033 797 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 FAM178BQ8IXR5 827 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 LRRC43Q8N309 656 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 CNNM3Q8NE01 707 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 MYLIPQ8WY64 445 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 SAMD11Q96NU1 681 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 CDX2Q99626 313 aaPredicted RBP21.71■■□□□ 1.07
HDAC7-220ENST00000471235 ACO2Q99798 780 aaKnown RBP21.71■■□□□ 1.07
HDAC7-220ENST00000471235 TARS2Q9BW92 718 aaKnown RBP21.71■■□□□ 1.07
HDAC7-220ENST00000471235 TRIM9Q9C026 710 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 LRRC27Q9C0I9 530 aa21.71■■□□□ 1.07
HDAC7-220ENST00000471235 ITGA4P13612 1032 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 CTNNB1P35222 781 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 CNNM4Q6P4Q7 775 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 GLB1LQ6UWU2 654 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 TMEM192Q8IY95 271 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 CEP57L1Q8IYX8 460 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 FBXO22Q8NEZ5 403 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 GDPD5Q8WTR4 605 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 ADPGKQ9BRR6 497 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 APOL6Q9BWW8 343 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 CWH43Q9H720 699 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 RSAD1Q9HA92 442 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 SEL1LQ9UBV2 794 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 TNFSF13BQ9Y275 285 aa21.7■■□□□ 1.06
HDAC7-220ENST00000471235 RFXAPO00287 272 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 ABLIM1O14639 778 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 OFD1O75665 1012 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 SLFN14P0C7P3 912 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 SYKP43405 635 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 ASIC1P78348 528 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 AMPD3Q01432 767 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 COASYQ13057 564 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 DCAF4L1Q3SXM0 396 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 EPC2Q52LR7 807 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 LRRC55Q6ZSA7 311 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 GRAMD1CQ8IYS0 662 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 C7orf25Q9BPX7 421 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 RNF39Q9H2S5 420 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 PANK4Q9NVE7 773 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 USP25Q9UHP3 1055 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 INPP5FQ9Y2H2 1132 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 RWDD3Q9Y3V2 267 aa21.69■■□□□ 1.06
HDAC7-220ENST00000471235 SCP2P22307 547 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 PROZP22891 400 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 CASP1P29466 404 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 AFMP43652 599 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 ZNF568Q3ZCX4 644 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 NOMO2Q5JPE7 1267 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 CCDC65Q8IXS2 484 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 HACE1Q8IYU2 909 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 RSPH1Q8WYR4 309 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
HDAC7-220ENST00000471235 MRPL9Q9BYD2 267 aaKnown RBP21.68■■□□□ 1.06
HDAC7-220ENST00000471235 CDT1Q9H211 546 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 ST6GALNAC4Q9H4F1 302 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 PTPRHQ9HD43 1115 aa21.68■■□□□ 1.06
HDAC7-220ENST00000471235 OLFML3Q9NRN5 406 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms