RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 PPFIA4O75335 1185 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 PRPF6O94906 941 aaKnown RBP9.17□□□□□ -0.94
FDPS-209ENST00000471117 OATP04181 439 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 NMT1P30419 496 aaKnown RBP9.17□□□□□ -0.94
FDPS-209ENST00000471117 HOXD13P35453 343 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 MTIF2P46199 727 aaKnown RBP9.17□□□□□ -0.94
FDPS-209ENST00000471117 NPEPPSP55786 919 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 TAP1Q03518 808 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 MAPK7Q13164 816 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 DGKDQ16760 1214 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 BMT2Q1RMZ1 405 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 PLA2G4FQ68DD2 849 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 LRRC55Q6ZSA7 311 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 PLPPR4Q7Z2D5 763 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 BMP8AQ7Z5Y6 402 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 RNF180Q86T96 592 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 TLK2Q86UE8 772 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 DAW1Q8N136 415 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 ZNF507Q8TCN5 953 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 GDPD5Q8WTR4 605 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 CEP170P1Q96L14 293 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 PCYT2Q99447 389 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 TUBGCP2Q9BSJ2 902 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 KCTD10Q9H3F6 313 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 OLFML3Q9NRN5 406 aa9.17□□□□□ -0.94
FDPS-209ENST00000471117 SEPT9Q9UHD8 586 aaPredicted RBP9.17□□□□□ -0.94
FDPS-209ENST00000471117 GNEQ9Y223 722 aaKnown RBP9.17□□□□□ -0.94
FDPS-209ENST00000471117 EVPLQ92817 2033 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 UMODL1Q5DID0 1318 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 PES1O00541 588 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 EIF3DO15371 548 aaKnown RBP eCLIP9.16□□□□□ -0.941e-8■□□□□ 8.3
FDPS-209ENST00000471117 ADCY6O43306 1168 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ZNF500O60304 480 aaPredicted RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 DUSP11O75319 330 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 STBD1O95210 358 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 GCNT3O95395 438 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 LGALS2P05162 132 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 TPM2P07951 284 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 MMP3P08254 477 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 ATP4AP20648 1035 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 SFPQP23246 707 aaKnown RBP eCLIP9.16□□□□□ -0.94
FDPS-209ENST00000471117 CPT1AP50416 773 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 CCL23P55773 120 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 FKBP3Q00688 224 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 UBXN1Q04323 297 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 GOLGA8FQ08AF8 430 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 GOLGA8DPQ0D2H9 430 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 KNOP1Q1ED39 458 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 ODR4Q5SWX8 454 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 PPP4R3CPQ6ZMV5 832 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ANO5Q75V66 913 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 MAEAQ7L5Y9 396 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 TRMT1LQ7Z2T5 733 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 PPFIBP1Q86W92 1011 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ZC3H3Q8IXZ2 948 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 FBXL6Q8N531 539 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 KIAA1524Q8TCG1 905 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ATP8B4Q8TF62 1192 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 EDAQ92838 391 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 LENG1Q96BZ8 264 aaPredicted RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 CEP63Q96MT8 703 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 FIZ1Q96SL8 496 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 SH2D3AQ9BRG2 576 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 TIPINQ9BVW5 301 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 NIFKQ9BYG3 293 aaKnown RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 IRF2BPLQ9H1B7 796 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 SPC25Q9HBM1 224 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ERAP1Q9NZ08 941 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ZNF215Q9UL58 517 aaPredicted RBP9.16□□□□□ -0.94
FDPS-209ENST00000471117 PPME1Q9Y570 386 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
FDPS-209ENST00000471117 ITIH6Q6UXX5 1313 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 A6NJR5 290 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 PDXKO00764 312 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 CALUO43852 315 aaPredicted RBP9.15□□□□□ -0.94
FDPS-209ENST00000471117 HBP1O60381 514 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 DGAT1O75907 488 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 RARBP10826 455 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 SKILP12757 684 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 HOXD8P13378 290 aaPredicted RBP9.15□□□□□ -0.94
FDPS-209ENST00000471117 MARK3P27448 753 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 CLCN1P35523 988 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 RFC5P40937 340 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 DNM2P50570 870 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 ACLYP53396 1101 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 CCZ1BP86790 482 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 CCZ1P86791 482 aaPredicted RBP9.15□□□□□ -0.94
FDPS-209ENST00000471117 EDRF1Q3B7T1 1238 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 MTERF2Q49AM1 385 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 ZC2HC1CQ53FD0 456 aaPredicted RBP9.15□□□□□ -0.94
FDPS-209ENST00000471117 TRIM67Q6ZTA4 783 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 EP400NLQ6ZTU2 488 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 STXBP4Q6ZWJ1 553 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 ZNF720Q7Z2F6 126 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 TRIM50Q86XT4 487 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 EXOC8Q8IYI6 725 aa9.15□□□□□ -0.94
FDPS-209ENST00000471117 C17orf53Q8N3J3 647 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms