RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 LZTS1Q9Y250 596 aa13.89□□□□□ -0.19
CCNL1-213ENST00000471044 TRIOO75962 3097 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 H3BQ06 376 aaPredicted RBP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 FSCN2O14926 492 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 CSPG5O95196 566 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 OR52Z1P0C646 297 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 SPATA31C1P0DKV0 1188 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 GTF2F1P35269 517 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 GNL2Q13823 731 aaKnown RBP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 MXD4Q14582 209 aaPredicted RBP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 ZNF174Q15697 407 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 KCNT2Q6UVM3 1135 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 EP400NLQ6ZTU2 488 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 RNF149Q8NC42 400 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 HELQQ8TDG4 1101 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 ZNF558Q96NG5 402 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 IGFLR1Q9H665 355 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 TUFT1Q9NNX1 390 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 TLR9Q9NR96 1032 aa13.88□□□□□ -0.19
CCNL1-213ENST00000471044 NOL7Q9UMY1 257 aaKnown RBP13.88□□□□□ -0.19
CCNL1-213ENST00000471044 LINC01565O15544 149 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 MED24O75448 989 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 U2AF2P26368 475 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■■■□ 20.8
CCNL1-213ENST00000471044 PPM1AP35813 382 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 ARL2P36404 184 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 TECP42680 631 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 PTENP60484 403 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 ERVFC1P60507 584 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 DLX2Q07687 328 aaPredicted RBP13.87□□□□□ -0.19
CCNL1-213ENST00000471044 PCBP1Q15365 356 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCNL1-213ENST00000471044 CATSPER3Q86XQ3 398 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 C4orf32Q8N8J7 132 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
CCNL1-213ENST00000471044 POLR3CQ9BUI4 534 aaPredicted RBP13.87□□□□□ -0.19
CCNL1-213ENST00000471044 UPF2Q9HAU5 1272 aaKnown RBP13.87□□□□□ -0.19
CCNL1-213ENST00000471044 FAM50BQ9Y247 325 aa13.87□□□□□ -0.19
CCNL1-213ENST00000471044 MYH11P35749 1972 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 PRR33A8MZF0 331 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 TBX10O75333 385 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 S1PR4O95977 384 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 ADH1BP00325 375 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 MUTP22033 750 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 RPA1P27694 616 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 AXLP30530 894 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 HOXA11P31270 313 aaPredicted RBP13.86□□□□□ -0.19
CCNL1-213ENST00000471044 NRIP1P48552 1158 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 MRE11P49959 708 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 TFDP1Q14186 410 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 MRPL10Q7Z7H8 261 aaKnown RBP13.86□□□□□ -0.19
CCNL1-213ENST00000471044 SLC39A11Q8N1S5 342 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 EFHBQ8N7U6 833 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 ASAP3Q8TDY4 903 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 MICAL1Q8TDZ2 1067 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 PIGOQ8TEQ8 1089 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 LPPQ93052 612 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 PGBD4Q96DM1 585 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 SPG21Q9NZD8 308 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
CCNL1-213ENST00000471044 DBR1Q9UK59 544 aaKnown RBP13.86□□□□□ -0.19
CCNL1-213ENST00000471044 KIF3AQ9Y496 699 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 PCDHGC5Q9Y5F6 944 aa13.86□□□□□ -0.19
CCNL1-213ENST00000471044 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 A0A087WWV3 80 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 FSD2A1L4K1 749 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 CARNS1A5YM72 827 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 MEIS3P2A8K0S8 358 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 MBTPS2O43462 519 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 OFD1O75665 1012 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 ERLIN2O94905 339 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 GLRA2P23416 452 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 KRT17Q04695 432 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 CAPSQ13938 189 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 UBXN11Q5T124 520 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 CNNM3Q8NE01 707 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 TMX3Q96JJ7 454 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 MSLNLQ96KJ4 702 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 NACC1Q96RE7 527 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 CDCA3Q99618 268 aaPredicted RBP13.85□□□□□ -0.19
CCNL1-213ENST00000471044 NFKBIZQ9BYH8 718 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 TLE6Q9H808 572 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
CCNL1-213ENST00000471044 TSPAN1O60635 241 aa13.84□□□□□ -0.19
CCNL1-213ENST00000471044 USO1O60763 962 aaKnown RBP13.84□□□□□ -0.19
CCNL1-213ENST00000471044 CD2BP2O95400 341 aaKnown RBP13.84□□□□□ -0.19
CCNL1-213ENST00000471044 GLP2RO95838 553 aa13.84□□□□□ -0.19
CCNL1-213ENST00000471044 NCLP19338 710 aaKnown RBP13.84□□□□□ -0.19
CCNL1-213ENST00000471044 SSTR3P32745 418 aaPredicted RBP13.84□□□□□ -0.19
CCNL1-213ENST00000471044 PBX3P40426 434 aa13.84□□□□□ -0.19
CCNL1-213ENST00000471044 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
CCNL1-213ENST00000471044 MCM2P49736 904 aa13.84□□□□□ -0.19
CCNL1-213ENST00000471044 NDUFV1P49821 464 aa13.84□□□□□ -0.19
CCNL1-213ENST00000471044 TOB1P50616 345 aaPredicted RBP13.84□□□□□ -0.19
CCNL1-213ENST00000471044 BCAR1P56945 870 aa13.84□□□□□ -0.19
CCNL1-213ENST00000471044 SMAD4Q13485 552 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms