RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CNTNAP2Q9UHC6 1331 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 DDX11L8A8MPP1 907 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 BTBD18B2RXH4 712 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 FOXK2Q01167 660 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 PPP2R5CQ13362 524 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 LONRF3Q496Y0 759 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 CWF19L1Q69YN2 538 aaKnown RBP10.1□□□□□ -0.79
SF3A1-206ENST00000471037 ATL3Q6DD88 541 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 TMC5Q6UXY8 1006 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 CLEC17AQ6ZS10 378 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 ASCL5Q7RTU5 278 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 KRT25Q7Z3Z0 450 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 ZNF280BQ86YH2 543 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 NOSTRINQ8IVI9 506 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 KSR1Q8IVT5 923 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 EXOC8Q8IYI6 725 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
SF3A1-206ENST00000471037 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 NLRP4Q96MN2 994 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 KLHL5Q96PQ7 755 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 EMILIN2Q9BXX0 1053 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 RHOBTB2Q9BYZ6 727 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 GBP3Q9H0R5 595 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 MFSD1Q9H3U5 465 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 RSAD1Q9HA92 442 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 KANSL3Q9P2N6 904 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 DUSP12Q9UNI6 340 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 COL4A3BPQ9Y5P4 624 aa10.1□□□□□ -0.79
SF3A1-206ENST00000471037 CFAP54Q96N23 3096 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 CCDC194A0A1B0GVG4 234 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 INPPL1O15357 1258 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 DKC1O60832 514 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 DDHD2O94830 711 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 PAPLNO95428 1278 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 CNPP09543 421 aaKnown RBP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 AOC1P19801 751 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 HOXA11P31270 313 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 QARSP47897 775 aaKnown RBP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 NR5A1Q13285 461 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 TDGQ13569 410 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 NONOQ15233 471 aaKnown RBP eCLIP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 UBXN11Q5T124 520 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 PLA2G4FQ68DD2 849 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 SRGAP1Q7Z6B7 1085 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 FEZF2Q8TBJ5 459 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 OXER1Q8TDS5 423 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 SLC7A3Q8WY07 619 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 TNFRSF25Q93038 417 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 ZNF396Q96N95 335 aaPredicted RBP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 DHX33Q9H6R0 707 aaKnown RBP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 KCNMB3Q9NPA1 279 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 IGSF9Q9P2J2 1179 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 DDX25Q9UHL0 483 aaKnown RBP10.09□□□□□ -0.79
SF3A1-206ENST00000471037 VAV3Q9UKW4 847 aa10.09□□□□□ -0.79
SF3A1-206ENST00000471037 MYO10Q9HD67 2058 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 EML1O00423 815 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 NRP1O14786 923 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 SLC37A4O43826 429 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 EFEMP2O95967 443 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 SOD2P04179 222 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 ALDH2P05091 517 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 URODP06132 367 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 NPR3P17342 541 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 NCLP19338 710 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 KLRC2P26717 231 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 RFC5P40937 340 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 AFF1P51825 1210 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 NPEPPSP55786 919 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 PCBP1Q15365 356 aaKnown RBP eCLIP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 LETM2Q2VYF4 491 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 RILPL1Q5EBL4 403 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 PPP4R3AQ6IN85 833 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 CYP26C1Q6V0L0 522 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 CCDC105Q8IYK2 499 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 RNF168Q8IYW5 571 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 CNNM3Q8NE01 707 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 PRPF31Q8WWY3 499 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 PSPC1Q8WXF1 523 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 NKD2Q969F2 451 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 FAM20AQ96MK3 541 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 RTP3Q9BQQ7 232 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 HERC2P3Q9BVR0 1158 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 MINDY3Q9H8M7 445 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 KCNK12Q9HB15 430 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 UBN1Q9NPG3 1134 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 MRPL17Q9NRX2 175 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 MARCH5Q9NX47 278 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 WRAP73Q9P2S5 460 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 NOL7Q9UMY1 257 aaKnown RBP10.08□□□□□ -0.8
SF3A1-206ENST00000471037 SSX2IPQ9Y2D8 614 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 FAN1Q9Y2M0 1017 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 DMDP11532 3685 aa10.08□□□□□ -0.8
SF3A1-206ENST00000471037 C2orf16Q68DN1 1984 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 TBX3O15119 743 aa10.07□□□□□ -0.8
SF3A1-206ENST00000471037 ASAP2O43150 1006 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms