RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CDC14BO60729 498 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 HERVK_113P62684 666 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 ADAM8P78325 824 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 PHC1P78364 1004 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 ST5P78524 1137 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 TMEM132BQ14DG7 1078 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 TBR1Q16650 682 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 FAM47CQ5HY64 1035 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 LMBR1Q8WVP7 490 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 GBP4Q96PP9 640 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 FDXACB1Q9BRP7 624 aaPredicted RBP3.62□□□□□ -1.83
UBXN4-206ENST00000470687 SLC52A1Q9NWF4 448 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 CEP72Q9P209 647 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 EDARQ9UNE0 448 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 PPP2R3BQ9Y5P8 575 aa3.62□□□□□ -1.83
UBXN4-206ENST00000470687 MYOM3Q5VTT5 1437 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 TCOF1Q13428 1488 aaKnown RBP3.61□□□□□ -1.83
UBXN4-206ENST00000470687 CCDC141Q6ZP82 1450 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 EHBP1L1Q8N3D4 1523 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 PLXNC1O60486 1568 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 PRSS38A1L453 326 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 B4E1Z4 1266 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 FOXP2O15409 715 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 BMP5P22003 454 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 ALDH6A1Q02252 535 aaKnown RBP3.61□□□□□ -1.83
UBXN4-206ENST00000470687 ACAP1Q15027 740 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 CCDC142Q17RM4 750 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 DDX46Q7L014 1031 aaKnown RBP3.61□□□□□ -1.83
UBXN4-206ENST00000470687 KCNK18Q7Z418 384 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 ULK2Q8IYT8 1036 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 TACO1Q9BSH4 297 aaKnown RBP3.61□□□□□ -1.83
UBXN4-206ENST00000470687 TLR9Q9NR96 1032 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.61□□□□□ -1.83
UBXN4-206ENST00000470687 AURKAIP1Q9NWT8 199 aaPredicted RBP3.61□□□□□ -1.83
UBXN4-206ENST00000470687 MAGEL2Q9UJ55 1249 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 CAMSAP1Q5T5Y3 1602 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 ABCA6Q8N139 1617 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 KANK1Q14678 1352 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 TNRQ92752 1358 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 DISP3Q9P2K9 1392 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 ARHGAP31Q2M1Z3 1444 aa3.61□□□□□ -1.83
UBXN4-206ENST00000470687 MED14O60244 1454 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 PZPP20742 1482 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 SYCP2Q9BX26 1530 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ARHGEF5Q12774 1597 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 INO80Q9ULG1 1556 aaPredicted RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 LTBP4Q8N2S1 1624 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 FOXN1O15353 648 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ZRANB2O95218 330 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 CLEC2LP0C7M8 214 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 NAT1P18440 290 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 PTGS1P23219 599 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 POLD1P28340 1107 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 HIBADHP31937 336 aaKnown RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 IARSP41252 1262 aaKnown RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 FXR1P51114 621 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 MANFP55145 182 aaKnown RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 TMPRSS15P98073 1019 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 CD83Q01151 205 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 FOXL1Q12952 345 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 TOP3AQ13472 1001 aaPredicted RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 FAM50AQ14320 339 aaKnown RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 LRRC32Q14392 662 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 NOLC1Q14978 699 aaKnown RBP eCLIP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 EPHA7Q15375 998 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ARHGAP44Q17R89 818 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ZMAT1Q5H9K5 638 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 PITRM1Q5JRX3 1037 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 UBE2R2Q712K3 238 aaPredicted RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 NLGN4XQ8N0W4 816 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 CNTD1Q8N815 330 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ZNF610Q8N9Z0 462 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 SLC5A5Q92911 643 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 TTPALQ9BTX7 342 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ZDHHC5Q9C0B5 715 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 POFUT1Q9H488 388 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 IFT22Q9H7X7 185 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 GALNT8Q9NY28 637 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 REXO2Q9Y3B8 237 aaKnown RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 NR2E1Q9Y466 385 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ASB1Q9Y576 335 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 SUPT6HQ7KZ85 1726 aaKnown RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ZNF644Q9H582 1327 aaPredicted RBP3.6□□□□□ -1.83
UBXN4-206ENST00000470687 VPS8Q8N3P4 1428 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 NCOA2Q15596 1464 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 KDM5DQ9BY66 1539 aa3.6□□□□□ -1.83
UBXN4-206ENST00000470687 ZNF142P52746 1687 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 LRRIQ1Q96JM4 1722 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 SIGLEC1Q9BZZ2 1709 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 PRAMEF25A6NGN4 478 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 PPM1GO15355 546 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 ZEB2O60315 1214 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 CUTAO60888 179 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 PFKMP08237 780 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 ENO2P09104 434 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 ADRA1BP35368 520 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 MSX2P35548 267 aaPredicted RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 RPS19P39019 145 aaKnown RBP3.59□□□□□ -1.83
UBXN4-206ENST00000470687 FNTBP49356 437 aa3.59□□□□□ -1.83
UBXN4-206ENST00000470687 RRADP55042 308 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms