RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CYP4A22Q5TCH4 519 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 AADACL4Q5VUY2 407 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 FAM171BQ6P995 826 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CCDC81Q6ZN84 652 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 PPP1R42Q7Z4L9 355 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 FAM124AQ86V42 546 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ERICH1Q86X53 443 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 C7orf61Q8IZ16 206 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 NAT8LQ8N9F0 302 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 IL17REQ8NFR9 667 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 DYDC1Q8WWB3 177 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ATL1Q8WXF7 558 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CEP19Q96LK0 163 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SECISBP2Q96T21 854 aaKnown RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 TEX13BQ9BXU2 312 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 EDEM3Q9BZQ6 932 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 API5Q9BZZ5 524 aaKnown RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 KLHL4Q9C0H6 718 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 TNKS2Q9H2K2 1166 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 MROH8Q9H579 483 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 CCDC177Q9NQR7 707 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF277Q9NRM2 450 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 RASSF1Q9NS23 344 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 FARSBQ9NSD9 589 aaKnown RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 KLC4Q9NSK0 619 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 ZNF624Q9P2J8 865 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 GIMAP2Q9UG22 337 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 HCN2Q9UL51 889 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 HPCAL4Q9UM19 191 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 FAM32AQ9Y421 112 aaKnown RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 NFE2L3Q9Y4A8 694 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 TELO2Q9Y4R8 837 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 PCDHGC4Q9Y5F7 938 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SNX9Q9Y5X1 595 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 AK5Q9Y6K8 562 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 SLC4A7Q9Y6M7 1214 aa5.52□□□□□ -1.53
COL3A1-205ENST00000470167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.52□□□□□ -1.53
COL3A1-205ENST00000470167 MROH5Q6ZUA9 1318 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 F8W031 263 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 STX16-NPEPL1H3BU86 382 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 K7ELQ4 463 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 KRIT1O00522 736 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 EBAG9O00559 213 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 BNIP3LO60238 219 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 PALMO75781 387 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 SLU7O95391 586 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GSTT2P0CG29 244 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GSTT2BP0CG30 244 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 MAPTP10636 758 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 PDGFRAP16234 1089 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 DDX5P17844 614 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 M6PRP20645 277 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 SYT1P21579 422 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TARSP26639 723 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CDC25CP30307 473 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 HOXA6P31267 233 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 SERPINB6P35237 376 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ADCY8P40145 1251 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ABCG1P45844 678 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CDKN1CP49918 316 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 AP3M2P53677 418 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TGFB2P61812 414 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 POLR2GP62487 172 aaKnown RBP eCLIP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 MLLT1Q03111 559 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TNP2Q05952 138 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GALNT1Q10472 559 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TBX2Q13207 712 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 PRKG2Q13237 762 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GRM1Q13255 1194 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 DRP2Q13474 957 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 STK38Q15208 465 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 NONOQ15233 471 aaKnown RBP eCLIP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GEN1Q17RS7 908 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 HECTD3Q5T447 861 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TTBK2Q6IQ55 1244 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 FAM180BQ6P0A1 224 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 FOXR1Q6PIV2 292 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CNSTQ6PJW8 725 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 CRELD2Q6UXH1 353 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TPTE2Q6XPS3 522 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ARHGAP36Q6ZRI8 547 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 USP50Q70EL3 339 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 BRINP3Q76B58 766 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 RSRC2Q7L4I2 434 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 PTF1AQ7RTS3 328 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 KRT28Q7Z3Y7 464 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 KRT27Q7Z3Y8 459 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 RAB44Q7Z6P3 723 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 SLC9B2Q86UD5 537 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 VPS36Q86VN1 386 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 DGKHQ86XP1 1220 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 RHOT2Q8IXI1 618 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 GALNT12Q8IXK2 581 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 FAM186BQ8IYM0 893 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 TAB3Q8N5C8 712 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ENAHQ8N8S7 591 aaPredicted RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 FBXO30Q8TB52 745 aa5.51□□□□□ -1.53
COL3A1-205ENST00000470167 NOC3LQ8WTT2 800 aaKnown RBP5.51□□□□□ -1.53
COL3A1-205ENST00000470167 ANKS1AQ92625 1134 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms