RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TRIM6Q9C030 488 aaPredicted RBP13.86□□□□□ -0.19
SPTLC1-204ENST00000469778 BLZF1Q9H2G9 400 aa13.86□□□□□ -0.19
SPTLC1-204ENST00000469778 LRFN2Q9ULH4 789 aa13.86□□□□□ -0.19
SPTLC1-204ENST00000469778 ZMYM2Q9UBW7 1377 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 KLRC4O43908 158 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 GJB5O95377 273 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 GCNT3O95395 438 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 MCF2P10911 925 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 BMT2Q1RMZ1 405 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 KMT5BQ4FZB7 885 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 C9orf50Q5SZB4 431 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 L1TD1Q5T7N2 865 aaKnown RBP13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 EPM2AIP1Q7L775 607 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 ECHDC2Q86YB7 292 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 HERC6Q8IVU3 1022 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 GOLGA5Q8TBA6 731 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 SMARCE1Q969G3 411 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 RAD9AQ99638 391 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 KIFC3Q9BVG8 833 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 PTPRHQ9HD43 1115 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 FAM105AQ9NUU6 356 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 COLQQ9Y215 455 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 INSL6Q9Y581 213 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.85□□□□□ -0.19
SPTLC1-204ENST00000469778 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 CLDN3O15551 220 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 MGEA5O60502 916 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 FGFR4P22455 802 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 PROZP22891 400 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 NMT1P30419 496 aaKnown RBP13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 LIG4P49917 911 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 SMAD3P84022 425 aaKnown RBP13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 RAB30Q15771 203 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 COBLL1Q53SF7 1204 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.84□□□□□ -0.193e-8■■□□□ 13.9
SPTLC1-204ENST00000469778 TAS1R3Q7RTX0 852 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 GRAMD1CQ8IYS0 662 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 SYCP3Q8IZU3 236 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 TRIML1Q8N9V2 468 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 TMEM174Q8WUU8 243 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 BICD1Q96G01 975 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 TSPAN18Q96SJ8 248 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 KANSL3Q9P2N6 904 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 PCDHA5Q9Y5H7 936 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 PCDHA11Q9Y5I1 949 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 STYXL1Q9Y6J8 313 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 TET1Q8NFU7 2136 aa13.84□□□□□ -0.19
SPTLC1-204ENST00000469778 SCN5AQ14524 2016 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 B4GALT5O43286 388 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 HTRA4P83105 476 aaPredicted RBP13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 MCL1Q07820 350 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 PNOCQ13519 176 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 TCTN1Q2MV58 587 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 HS2ST1Q7LGA3 356 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 ZNF598Q86UK7 904 aaKnown RBP13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 TARS2Q9BW92 718 aaKnown RBP13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 GBP3Q9H0R5 595 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 PDZD7Q9H5P4 517 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 TBC1D7Q9P0N9 293 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 KIAA1468Q9P260 1216 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 GIT1Q9Y2X7 761 aa13.83□□□□□ -0.2
SPTLC1-204ENST00000469778 MYH11P35749 1972 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 DGKIO75912 1065 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 LDHAP00338 332 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 ITGA4P13612 1032 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 GARTP22102 1010 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 STK4Q13043 487 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 MYBPC2Q14324 1141 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 KNOP1Q1ED39 458 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 SKOR2Q2VWA4 1001 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 ZC2HC1CQ53FD0 456 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 ZNF658Q5TYW1 1059 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 GLB1LQ6UWU2 654 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 GUF1Q8N442 669 aaKnown RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 SCFD1Q8WVM8 642 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 CPB2Q96IY4 423 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 TMEM117Q9H0C3 514 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 KIAA1586Q9HCI6 787 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 SLC39A2Q9NP94 309 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 TOPORSQ9NS56 1045 aaPredicted RBP13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 MSRAQ9UJ68 235 aa13.82□□□□□ -0.2
SPTLC1-204ENST00000469778 TTC3P53804 2025 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 SIP14410 1827 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 A0A0B4J269 797 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 INPPL1O15357 1258 aa13.81□□□□□ -0.2
SPTLC1-204ENST00000469778 TLL1O43897 1013 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms