RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 GIPC1O14908 333 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 GAS2O43903 313 aaKnown RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 AFF1P51825 1210 aaKnown RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 SWSAP1Q6NVH7 229 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 EFCAB12Q6NXP0 572 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 CEP68Q76N32 757 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 ZNF687Q8N1G0 1237 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 ITFG1Q8TB96 612 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 B3GALT6Q96L58 329 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 FAM193BQ96PV7 902 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 TMEM175Q9BSA9 504 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 ARRDC1-AS1Q9H2J1 176 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 RWDD1Q9H446 243 aaPredicted RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 FAM105AQ9NUU6 356 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 SEC63Q9UGP8 760 aaKnown RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 PCDHA6Q9UN73 950 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 PIN4Q9Y237 131 aaKnown RBP14.28□□□□□ -0.12
HDAC6-217ENST00000469223 PCDHA8Q9Y5H6 950 aa14.28□□□□□ -0.12
HDAC6-217ENST00000469223 ZMYND10O75800 440 aa14.27□□□□□ -0.13
HDAC6-217ENST00000469223 TROAPQ12815 778 aa14.27□□□□□ -0.13
HDAC6-217ENST00000469223 IMMTQ16891 758 aaKnown RBP14.27□□□□□ -0.13
HDAC6-217ENST00000469223 SOWAHCQ53LP3 525 aaPredicted RBP14.27□□□□□ -0.13
HDAC6-217ENST00000469223 HEATR6Q6AI08 1181 aaKnown RBP14.27□□□□□ -0.13
HDAC6-217ENST00000469223 IER2Q9BTL4 223 aa14.27□□□□□ -0.13
HDAC6-217ENST00000469223 SPZ1Q9BXG8 430 aa14.27□□□□□ -0.13
HDAC6-217ENST00000469223 SMOC1Q9H4F8 434 aa14.27□□□□□ -0.13
HDAC6-217ENST00000469223 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.13
HDAC6-217ENST00000469223 F8W810 466 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 AXIN1O15169 862 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 MAGEB2O15479 319 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 POMCP01189 267 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 SKIP12755 728 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 RPL17P18621 184 aaKnown RBP14.26□□□□□ -0.13
HDAC6-217ENST00000469223 TMOD1P28289 359 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 DSG1Q02413 1049 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 MIS18BP1Q6P0N0 1132 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 NPAS3Q8IXF0 933 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 RNF168Q8IYW5 571 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-217ENST00000469223 ING5Q8WYH8 240 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 TRAIPQ9BWF2 469 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 LY9Q9HBG7 655 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 CHST12Q9NRB3 414 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 ZBTB47Q9UFB7 747 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-217ENST00000469223 CEP131Q9UPN4 1083 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 APC2O95996 2303 aa14.26□□□□□ -0.13
HDAC6-217ENST00000469223 NUP205Q92621 2012 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 VWA8A3KMH1 1905 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 ASCC3Q8N3C0 2202 aaKnown RBP14.25□□□□□ -0.13
HDAC6-217ENST00000469223 ALDH2P05091 517 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 ZNF806P0C7X5 589 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 SFPQP23246 707 aaKnown RBP eCLIP14.25□□□□□ -0.13
HDAC6-217ENST00000469223 CNR2P34972 360 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 CXCL12P48061 93 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 RAB27AP51159 221 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 CEP55Q53EZ4 464 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 LILRA6Q6PI73 481 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 MAMSTRQ6ZN01 415 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 AGMOQ6ZNB7 445 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 LONP2Q86WA8 852 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 SCNM1Q9BWG6 230 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 PLA2G2FQ9BZM2 168 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 RSAD1Q9HA92 442 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 POLIQ9UNA4 740 aa14.25□□□□□ -0.13
HDAC6-217ENST00000469223 CCL16O15467 120 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 EPN2O95208 641 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 OR1G1P47890 313 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 GAS6Q14393 721 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 LIN9Q5TKA1 542 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 RNF43Q68DV7 783 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 DNASE1L2Q92874 299 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 PGBD4Q96DM1 585 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 KIF12Q96FN5 646 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 GCOM2Q9BZD3 368 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-217ENST00000469223 LMAN1LQ9HAT1 526 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 FBXW11Q9UKB1 542 aa14.24□□□□□ -0.13
HDAC6-217ENST00000469223 ZNF462Q96JM2 2506 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 K7ESF4 209 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 MAN2B1O00754 1011 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 IFIT3O14879 490 aaKnown RBP14.23□□□□□ -0.13
HDAC6-217ENST00000469223 ECI2O75521 394 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 EFEMP2O95967 443 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 DRP2Q13474 957 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 TCEAL6Q6IPX3 200 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 KIAA1211LQ6NV74 962 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 TCEAL3Q969E4 200 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 MBOAT7Q96N66 472 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 HCFC1R1Q9NWW0 138 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 PCDHB2Q9Y5E7 798 aa14.23□□□□□ -0.13
HDAC6-217ENST00000469223 MAFBQ9Y5Q3 323 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-217ENST00000469223 KIF26AQ9ULI4 1882 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-217ENST00000469223 CNTNAP2Q9UHC6 1331 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 hCG_1642624A0A1W2PR95 340 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 ZNF623O75123 536 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 PLEKHA8P1O95397 391 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 C1RP00736 705 aa14.22□□□□□ -0.13
HDAC6-217ENST00000469223 C8AP07357 584 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms