RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PPP3CAQ08209 521 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 MALLQ13021 153 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 CLUL1Q15846 466 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 FAM214AQ32MH5 1076 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 PGM2L1Q6PCE3 622 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 PALM2Q8IXS6 379 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 ZNF480Q8WV37 535 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 FATE1Q969F0 183 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 MPHOSPH9Q99550 1183 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 SMAD5Q99717 465 aaKnown RBP7.29□□□□□ -1.24
XRN1-207ENST00000468894 MKS1Q9NXB0 559 aa7.29□□□□□ -1.24
XRN1-207ENST00000468894 HECAQ9UBI9 543 aaPredicted RBP7.29□□□□□ -1.24
XRN1-207ENST00000468894 MUSKO15146 869 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA12O60330 932 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 GYPEP15421 78 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 MUM1L1Q5H9M0 696 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 FKBP15Q5T1M5 1219 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 SPTY2D1Q68D10 685 aaPredicted RBP7.28□□□□□ -1.24
XRN1-207ENST00000468894 OR5M3Q8NGP4 307 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 HOXB13Q92826 284 aaPredicted RBP7.28□□□□□ -1.24
XRN1-207ENST00000468894 ARL8AQ96BM9 186 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 FAM89AQ96GI7 184 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 FUBP3Q96I24 572 aaKnown RBP eCLIP7.28□□□□□ -1.24
XRN1-207ENST00000468894 FAXDC2Q96IV6 333 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 ZNF512Q96ME7 567 aaPredicted RBP7.28□□□□□ -1.24
XRN1-207ENST00000468894 GREM2Q9H772 168 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 GPRC5DQ9NZD1 345 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 TSC22D4Q9Y3Q8 395 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA9Q9Y5G4 932 aaKnown RBP7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA8Q9Y5G5 932 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA7Q9Y5G6 932 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA6Q9Y5G7 932 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA3Q9Y5H0 932 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 PCDHGA2Q9Y5H1 932 aa7.28□□□□□ -1.24
XRN1-207ENST00000468894 TNKSO95271 1327 aa7.27□□□□□ -1.24
XRN1-207ENST00000468894 RPTORQ8N122 1335 aa7.27□□□□□ -1.24
XRN1-207ENST00000468894 SHTN1A0MZ66 631 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 CAPN14A8MX76 684 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 ADCY6O43306 1168 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 ITGA10O75578 1167 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 MCAMP43121 646 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 PCBP2Q15366 365 aaKnown RBP eCLIP7.27□□□□□ -1.25
XRN1-207ENST00000468894 ELAVL1Q15717 326 aaKnown RBP7.27□□□□□ -1.25
XRN1-207ENST00000468894 GPR156Q8NFN8 814 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 SSH1Q8WYL5 1049 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 JADE3Q92613 823 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 TRPS1Q9UHF7 1281 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 TUBD1Q9UJT1 453 aa7.27□□□□□ -1.25
XRN1-207ENST00000468894 AKR1B10O60218 316 aa7.26□□□□□ -1.25
XRN1-207ENST00000468894 NCLP19338 710 aaKnown RBP7.26□□□□□ -1.25
XRN1-207ENST00000468894 ANAPC15P60006 121 aa7.26□□□□□ -1.25
XRN1-207ENST00000468894 KRT85P78386 507 aa7.26□□□□□ -1.25
XRN1-207ENST00000468894 MRPL49Q13405 166 aaKnown RBP7.26□□□□□ -1.25
XRN1-207ENST00000468894 PRKD1Q15139 912 aaPredicted RBP7.26□□□□□ -1.25
XRN1-207ENST00000468894 Q6ZVL8 140 aa7.26□□□□□ -1.25
XRN1-207ENST00000468894 STAG1Q8WVM7 1258 aa7.26□□□□□ -1.25
XRN1-207ENST00000468894 IL17RAQ96F46 866 aa7.26□□□□□ -1.25
XRN1-207ENST00000468894 RBM12Q9NTZ6 932 aaKnown RBP7.26□□□□□ -1.25
XRN1-207ENST00000468894 XPOTO43592 962 aaKnown RBP7.25□□□□□ -1.25
XRN1-207ENST00000468894 PHF2O75151 1096 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 C5AR1P21730 350 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 ADSLP30566 484 aaPredicted RBP7.25□□□□□ -1.25
XRN1-207ENST00000468894 GZMKP49863 264 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 HHEXQ03014 270 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 PTPN21Q16825 1174 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 SPDYAQ5MJ70 313 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 MFSD5Q6N075 450 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 SGMS1Q86VZ5 419 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 ELOA2Q8IYF1 753 aaPredicted RBP7.25□□□□□ -1.25
XRN1-207ENST00000468894 BORCS6Q96GS4 357 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 CDK5RAP1Q96SZ6 601 aaKnown RBP7.25□□□□□ -1.25
XRN1-207ENST00000468894 ADI1Q9BV57 179 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 TYW1Q9NV66 732 aaKnown RBP7.25□□□□□ -1.25
XRN1-207ENST00000468894 TESMINQ9Y4I5 508 aa7.25□□□□□ -1.25
XRN1-207ENST00000468894 C1QTNF3-AMACRE9PGA6 284 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 HOXA3O43365 443 aaPredicted RBP7.24□□□□□ -1.25
XRN1-207ENST00000468894 ECHS1P30084 290 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 CRHR1P34998 444 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 IGBP1P78318 339 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 MGAT2Q10469 447 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 SEPT2Q15019 361 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 ACAP2Q15057 778 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 PRAMEF14Q5SWL7 426 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 C1QL3Q5VWW1 255 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 Q6ZRM9 215 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 TRMT2AQ8IZ69 625 aaKnown RBP7.24□□□□□ -1.25
XRN1-207ENST00000468894 ANKRD35Q8N283 1001 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 MB21D1Q8N884 522 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 OR2I1PQ8NGU4 316 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 MDM1Q8TC05 714 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 MIEF2Q96C03 454 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 TEKT5Q96M29 485 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 LSM14BQ9BX40 385 aaKnown RBP7.24□□□□□ -1.25
XRN1-207ENST00000468894 SLC13A1Q9BZW2 595 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 ZBTB21Q9ULJ3 1066 aa7.24□□□□□ -1.25
XRN1-207ENST00000468894 ZMYM3Q14202 1370 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 NDUFS2O75306 463 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 GASTP01350 101 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 ACRV1P26436 265 aa7.23□□□□□ -1.25
XRN1-207ENST00000468894 HIBADHP31937 336 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms