RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 PHKA2P46019 1235 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 PRMT2P55345 433 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 TRIM32Q13049 653 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 NOLC1Q14978 699 aaKnown RBP eCLIP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 SNRNP35Q16560 246 aaKnown RBP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 EXOC3L4Q17RC7 722 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 TSR1Q2NL82 804 aaKnown RBP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 C1orf220Q5T0J3 134 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 MAP3K21Q5TCX8 1036 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 CBWD2Q8IUF1 395 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 KIAA0319LQ8IZA0 1049 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 ZBTB10Q96DT7 871 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 MAP7D2Q96T17 732 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 ACO2Q99798 780 aaKnown RBP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 LSM14BQ9BX40 385 aaKnown RBP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 IFT122Q9HBG6 1241 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 SPC25Q9HBM1 224 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 CEP72Q9P209 647 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 AGO2Q9UKV8 859 aaKnown RBP16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 TRIP11Q15643 1979 aa16.35■□□□□ 0.21
CRAMP1-206ENST00000468839 GOLGA8IPA6NC78 632 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 ZNF233A6NK53 670 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 GOLGA8JA6NMD2 632 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 ZEB2O60315 1214 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 HMGCRP04035 888 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 GJB1P08034 283 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 RARBP10826 455 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 PON1P27169 355 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 HOXC8P31273 242 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 CDK17Q00537 523 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 CYP24A1Q07973 514 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 MEA1Q16626 185 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 ZNF410Q86VK4 478 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 PLEKHO2Q8TD55 490 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 BAP1Q92560 729 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 ZBTB45Q96K62 511 aaPredicted RBP16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 NLRP4Q96MN2 994 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 MTG1Q9BT17 334 aaPredicted RBP16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 HAPLN2Q9GZV7 340 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 NUCKS1Q9H1E3 243 aaKnown RBP16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 GANQ9H2C0 597 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 FAM207AQ9NSI2 230 aaPredicted RBP16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 PRMT7Q9NVM4 692 aaPredicted RBP16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 FBXL5Q9UKA1 691 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 AKT3Q9Y243 479 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 USP20Q9Y2K6 914 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 DAAM1Q9Y4D1 1078 aa16.34■□□□□ 0.21
CRAMP1-206ENST00000468839 A0A087WZ62 844 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 MYADML2A6NDP7 307 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 EPHB6O15197 1021 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 ADAMTS4O75173 837 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 TOM1L1O75674 476 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 C6orf222P0C671 652 aaPredicted RBP16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 ELNP15502 786 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 SLC9A1P19634 815 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 PROZP22891 400 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 GTF2H1P32780 548 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 CLCN1P35523 988 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 GPC3P51654 580 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 HTRA3P83110 453 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 MBTD1Q05BQ5 628 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 GNASQ5JWF2 1037 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 WDR59Q6PJI9 974 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 TSHZ1Q6ZSZ6 1077 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 SRGAP1Q7Z6B7 1085 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 USP37Q86T82 979 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 KLHDC9Q8NEP7 349 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 PRIMPOLQ96LW4 560 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 FDXACB1Q9BRP7 624 aaPredicted RBP16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 SIX2Q9NPC8 291 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 PLAGL2Q9UPG8 496 aa16.33■□□□□ 0.2
CRAMP1-206ENST00000468839 ABLIM1O14639 778 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CLDN3O15551 220 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 GNAT1P11488 350 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CST5P28325 142 aaPredicted RBP16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CCND3P30281 292 aaPredicted RBP16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 DLG4P78352 724 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CLDN10P78369 228 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 MCL1Q07820 350 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 PPP3CAQ08209 521 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 PSMD6Q15008 389 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CBWD6Q4V339 395 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CBWD3Q5JTY5 395 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CBWD5Q5RIA9 395 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 E4F1Q66K89 784 aaPredicted RBP16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 CRELD2Q6UXH1 353 aaPredicted RBP16.32■□□□□ 0.2
CRAMP1-206ENST00000468839 ZNF710Q8N1W2 664 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms