RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CAP2P40123 477 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 PMS2P54278 862 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 ACTN3Q08043 901 aaPredicted RBP17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 CCDC121Q6ZUS5 278 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 KRT35Q92764 455 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 TLCD1Q96CP7 247 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 RASAL2Q9UJF2 1139 aa17.02■□□□□ 0.31
TSPAN4-211ENST00000468468 TISP43B9A030 160 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 KIAA0391O15091 583 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 USP8P40818 1118 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 HADHBP55084 474 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 CIAPIN1Q6FI81 312 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 HOOK3Q86VS8 718 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 RPUSD2Q8IZ73 545 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 UBL4BQ8N7F7 174 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MTMR14Q8NCE2 650 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 C18orf8Q96DM3 657 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MYOZ2Q9NPC6 264 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 SYNPO2Q9UMS6 1093 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MIF4GDA9UHW6 222 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 IPO5O00410 1097 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MARCKSL1P49006 195 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 VAMP7P51809 220 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 GPC5P78333 572 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 CETN1Q12798 172 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MYBPC2Q14324 1141 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 FKBP1CQ5VVH2 108 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 C11orf63Q6NUN7 778 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 ZNF746Q6NUN9 644 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 INTS8Q75QN2 995 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 FAM83AQ86UY5 434 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MDM1Q8TC05 714 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 FBXO25Q8TCJ0 367 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 CABS1Q96KC9 395 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 EPB41L4BQ9H329 900 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 PNMA2Q9UL42 364 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 SYNGAP1Q96PV0 1343 aa17.01■□□□□ 0.31
TSPAN4-211ENST00000468468 PHF2O75151 1096 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 GCLMP48507 274 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 CDR1P51861 262 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 MNAT1P51948 309 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 ZDHHC24Q6UX98 284 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 NEK9Q8TD19 979 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 PABPC3Q9H361 631 aaKnown RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 CNOT10Q9H9A5 744 aaKnown RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 PKD2L1Q9P0L9 805 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 CHORDC1Q9UHD1 332 aaPredicted RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 TBC1D12O60347 775 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 PTGIRP43119 386 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 DRG2P55039 364 aaKnown RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 SETQ01105 290 aaPredicted RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 MESDQ14696 234 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 DALRD3Q5D0E6 543 aaKnown RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 B3GNT9Q6UX72 402 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 CCDC13Q8IYE1 715 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 PRELID2Q8N945 189 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 ZSWIM1Q9BR11 485 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 RANBP17Q9H2T7 1088 aaKnown RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17■□□□□ 0.31
TSPAN4-211ENST00000468468 TLDC2A0PJX2 215 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 C5orf60A6NFR6 353 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 NUDT17P0C025 328 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 CHRNA3P32297 505 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 DRP2Q13474 957 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 RASA3Q14644 834 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 DENND2CQ68D51 928 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 CPLX4Q7Z7G2 160 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 CHURC1Q8WUH1 139 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 JDP2Q8WYK2 163 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 RNF25Q96BH1 459 aaPredicted RBP17■□□□□ 0.31
TSPAN4-211ENST00000468468 PFASO15067 1338 aa17■□□□□ 0.31
TSPAN4-211ENST00000468468 GOLGA6L7A0A1B0GV03 622 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 HSPA6P17066 643 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 COMTP21964 271 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 CACNA2D3Q8IZS8 1091 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 VTI1AQ96AJ9 217 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 CEP89Q96ST8 783 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 CBWD1Q9BRT8 395 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 TMEM206Q9H813 350 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 GRHL1Q9NZI5 618 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 LARSQ9P2J5 1176 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 RBBP6Q7Z6E9 1792 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 NFKBIEO00221 500 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 RTN2O75298 545 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 SGPL1O95470 568 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 TGFB2P61812 414 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 BYSLQ13895 437 aaKnown RBP16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 EPC2Q52LR7 807 aa16.99■□□□□ 0.31
TSPAN4-211ENST00000468468 MIER3Q7Z3K6 550 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms