RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 SPRED2Q7Z698 418 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 CDR2LQ86X02 465 aaPredicted RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 TMEM192Q8IY95 271 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 ABI1Q8IZP0 508 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 FSIP1Q8NA03 581 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 SLC17A8Q8NDX2 589 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 CLP1Q92989 425 aaKnown RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 LPPQ93052 612 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 GUCD1Q96NT3 240 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 SAMD11Q96NU1 681 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 CDX2Q99626 313 aaPredicted RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 ACO2Q99798 780 aaKnown RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 TARS2Q9BW92 718 aaKnown RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 TRIM9Q9C026 710 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 PDZD7Q9H5P4 517 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 CERS4Q9HA82 394 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 PTPRHQ9HD43 1115 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 PANK4Q9NVE7 773 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 SEL1LQ9UBV2 794 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 SERTAD1Q9UHV2 236 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 IPPQ9Y573 584 aa14.97□□□□□ -0.01
SSBP1-206ENST00000467681 MRPL42Q9Y6G3 142 aaKnown RBP14.97□□□□□ -0.01
SSBP1-206ENST00000467681 MEIS3P2A8K0S8 358 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 ACTN4O43707 911 aaKnown RBP14.96□□□□□ -0.01
SSBP1-206ENST00000467681 NPTXRO95502 500 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 ITGA4P13612 1032 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 IDEP14735 1019 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 NMT1P30419 496 aaKnown RBP14.96□□□□□ -0.01
SSBP1-206ENST00000467681 SYKP43405 635 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 NDUFA8P51970 172 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 GTF2BQ00403 316 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 STRN3Q13033 797 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 PAN2Q504Q3 1202 aaKnown RBP14.96□□□□□ -0.01
SSBP1-206ENST00000467681 HERC4Q5GLZ8 1057 aaPredicted RBP14.96□□□□□ -0.01
SSBP1-206ENST00000467681 ATF7IP2Q5U623 682 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 GLB1LQ6UWU2 654 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 LRRC55Q6ZSA7 311 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 SFR1Q86XK3 245 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 FAM178BQ8IXR5 827 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 CCDC65Q8IXS2 484 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 CEP57L1Q8IYX8 460 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 ARNTL2Q8WYA1 636 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 RSPH1Q8WYR4 309 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 C17orf80Q9BSJ5 609 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 ST6GALNAC4Q9H4F1 302 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 PRDM12Q9H4Q4 367 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 UBN1Q9NPG3 1134 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 TYW1Q9NV66 732 aaKnown RBP14.96□□□□□ -0.01
SSBP1-206ENST00000467681 TBX20Q9UMR3 447 aa14.96□□□□□ -0.01
SSBP1-206ENST00000467681 GOLGA6L4A6NEF3 574 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 EPOPA6NHQ4 379 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 RB1P06400 928 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 ABCD1P33897 745 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 TPRNQ4KMQ1 711 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 EPC2Q52LR7 807 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 NOMO2Q5JPE7 1267 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 ZPBP2Q6X784 338 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 APBB1IPQ7Z5R6 666 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-206ENST00000467681 HACE1Q8IYU2 909 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 HELQQ8TDG4 1101 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 MRPS27Q92552 414 aaKnown RBP14.95□□□□□ -0.02
SSBP1-206ENST00000467681 PAGE5Q96GU1 130 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 ADPGKQ9BRR6 497 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 STRA6Q9BX79 667 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 TRIM6Q9C030 488 aaPredicted RBP14.95□□□□□ -0.02
SSBP1-206ENST00000467681 GOLPH3LQ9H4A5 285 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 KANSL3Q9P2N6 904 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 GIT1Q9Y2X7 761 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 RWDD3Q9Y3V2 267 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 HES2Q9Y543 173 aa14.95□□□□□ -0.02
SSBP1-206ENST00000467681 C5orf67F2Z3F1 127 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 K7ENM7 598 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 RFXAPO00287 272 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 ABLIM1O14639 778 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 INPPL1O15357 1258 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 ZNF202O95125 648 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 PROZP22891 400 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 AFMP43652 599 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 DCAF4L1Q3SXM0 396 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 ZC2HC1CQ53FD0 456 aaPredicted RBP14.94□□□□□ -0.02
SSBP1-206ENST00000467681 GAD1Q99259 594 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 TCHPQ9BT92 498 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 PLVAPQ9BX97 442 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 NXF3Q9H4D5 531 aaKnown RBP14.94□□□□□ -0.02
SSBP1-206ENST00000467681 CWH43Q9H720 699 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 MRPL44Q9H9J2 332 aaKnown RBP14.94□□□□□ -0.02
SSBP1-206ENST00000467681 RSAD1Q9HA92 442 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 OLFML3Q9NRN5 406 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 TBC1D7Q9P0N9 293 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 MTUS1Q9ULD2 1270 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 PRRC2BQ5JSZ5 2229 aaKnown RBP14.94□□□□□ -0.02
SSBP1-206ENST00000467681 MYH11P35749 1972 aa14.94□□□□□ -0.02
SSBP1-206ENST00000467681 PVALEFA0A1B0GWK0 134 aa14.93□□□□□ -0.02
SSBP1-206ENST00000467681 TOM1L1O75674 476 aa14.93□□□□□ -0.02
SSBP1-206ENST00000467681 PPP1R37O75864 691 aa14.93□□□□□ -0.02
SSBP1-206ENST00000467681 PIGRP01833 764 aa14.93□□□□□ -0.02
SSBP1-206ENST00000467681 POU3F3P20264 500 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms