RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 RPUSD2Q8IZ73 545 aaKnown RBP16.16■□□□□ 0.18
DDX56-208ENST00000467318 ADSSL1Q8N142 457 aa16.16■□□□□ 0.18
DDX56-208ENST00000467318 APBB2Q92870 758 aa16.16■□□□□ 0.18
DDX56-208ENST00000467318 BICD1Q96G01 975 aa16.16■□□□□ 0.18
DDX56-208ENST00000467318 DHTKD1Q96HY7 919 aaPredicted RBP16.16■□□□□ 0.18
DDX56-208ENST00000467318 GBP3Q9H0R5 595 aa16.16■□□□□ 0.18
DDX56-208ENST00000467318 AGPAT5Q9NUQ2 364 aa16.16■□□□□ 0.18
DDX56-208ENST00000467318 CGNQ9P2M7 1197 aaKnown RBP16.16■□□□□ 0.18
DDX56-208ENST00000467318 MAPK8IP1Q9UQF2 711 aa16.16■□□□□ 0.18
DDX56-208ENST00000467318 A0A1B0GUA9 196 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 RRP9O43818 475 aaKnown RBP16.15■□□□□ 0.18
DDX56-208ENST00000467318 TSPAN1O60635 241 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 PFKMP08237 780 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 ARF4P18085 180 aaPredicted RBP16.15■□□□□ 0.18
DDX56-208ENST00000467318 FGFR4P22455 802 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 CD52P31358 61 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 LIG4P49917 911 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 NOLC1Q14978 699 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX56-208ENST00000467318 STX1AQ16623 288 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 NOTUMQ6P988 496 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 HS2ST1Q7LGA3 356 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 GOLGA5Q8TBA6 731 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 SEPT8Q92599 483 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
DDX56-208ENST00000467318 FTHL17Q9BXU8 183 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 CBX8Q9HC52 389 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 ERVK-5Q9HDB9 667 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 SIP14410 1827 aa16.15■□□□□ 0.18
DDX56-208ENST00000467318 PPP1R3GB7ZBB8 358 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 PDXKO00764 312 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 TOM1L1O75674 476 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.18
DDX56-208ENST00000467318 HOXA11P31270 313 aaPredicted RBP16.14■□□□□ 0.18
DDX56-208ENST00000467318 HOXD13P35453 343 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 RGS19P49795 217 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 TMEM132AQ24JP5 1023 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 DPCR1Q3MIW9 517 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 ATF7IP2Q5U623 682 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 SLFN12LQ6IEE8 588 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 CCDC51Q96ER9 411 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 TARS2Q9BW92 718 aaKnown RBP16.14■□□□□ 0.18
DDX56-208ENST00000467318 PIN4Q9Y237 131 aaKnown RBP16.14■□□□□ 0.18
DDX56-208ENST00000467318 TNFSF13BQ9Y275 285 aa16.14■□□□□ 0.18
DDX56-208ENST00000467318 TANC1Q9C0D5 1861 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 N4BP3O15049 544 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 B4GALT5O43286 388 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 ZNF165P49910 485 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 CENPPQ6IPU0 288 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 FOXR2Q6PJQ5 311 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 APBB1IPQ7Z5R6 666 aaPredicted RBP16.14■□□□□ 0.17
DDX56-208ENST00000467318 DBF4BQ8NFT6 615 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 KCTD10Q9H3F6 313 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 SPTLC3Q9NUV7 552 aa16.14■□□□□ 0.17
DDX56-208ENST00000467318 TYW1Q9NV66 732 aaKnown RBP16.14■□□□□ 0.17
DDX56-208ENST00000467318 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 CLDN3O15551 220 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 TGFB1I1O43294 461 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 EDN1P05305 212 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 CSF2RAP15509 400 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 CD44P16070 742 aaKnown RBP16.13■□□□□ 0.17
DDX56-208ENST00000467318 SYN1P17600 705 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 CDC25BP30305 580 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 PPIGQ13427 754 aaKnown RBP eCLIP16.13■□□□□ 0.174e-8■■□□□ 12.8
DDX56-208ENST00000467318 DEFB128Q7Z7B8 93 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 TMEM174Q8WUU8 243 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 TCHPQ9BT92 498 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 TRAIPQ9BWF2 469 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 PTPRHQ9HD43 1115 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 TRAF3IP3Q9Y228 551 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 STYXL1Q9Y6J8 313 aa16.13■□□□□ 0.17
DDX56-208ENST00000467318 BICDL2A1A5D9 508 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 CALUO43852 315 aaPredicted RBP16.12■□□□□ 0.17
DDX56-208ENST00000467318 PROZP22891 400 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 CCNE1P24864 410 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 ERCC5P28715 1186 aaPredicted RBP16.12■□□□□ 0.17
DDX56-208ENST00000467318 LRRC63Q05C16 580 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 PAK1Q13153 545 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 DNTTIP2Q5QJE6 756 aaKnown RBP16.12■□□□□ 0.17
DDX56-208ENST00000467318 KLHL10Q6JEL2 608 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 CNKSR3Q6P9H4 555 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 SLC27A1Q6PCB7 646 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 BADQ92934 168 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 P2RX5Q93086 422 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 CPB2Q96IY4 423 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 LBHD1Q9BQE6 289 aaPredicted RBP16.12■□□□□ 0.17
DDX56-208ENST00000467318 NAT10Q9H0A0 1025 aaKnown RBP16.12■□□□□ 0.17
DDX56-208ENST00000467318 IL23AQ9NPF7 189 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 ZMYM2Q9UBW7 1377 aa16.12■□□□□ 0.17
DDX56-208ENST00000467318 DYNC1I1O14576 645 aa16.11■□□□□ 0.17
DDX56-208ENST00000467318 KIAA0391O15091 583 aaKnown RBP16.11■□□□□ 0.17
DDX56-208ENST00000467318 GARTP22102 1010 aa16.11■□□□□ 0.17
DDX56-208ENST00000467318 FPGSQ05932 587 aa16.11■□□□□ 0.17
DDX56-208ENST00000467318 NFIL3Q16649 462 aa16.11■□□□□ 0.17
DDX56-208ENST00000467318 EDRF1Q3B7T1 1238 aa16.11■□□□□ 0.17
DDX56-208ENST00000467318 TWF2Q6IBS0 349 aaKnown RBP16.11■□□□□ 0.17
DDX56-208ENST00000467318 SLC39A4Q6P5W5 647 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms