RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CYP7A1P22680 504 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 PLCD1P51178 756 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ERVK-21P61565 698 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 TNFAIP2Q03169 654 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ICA1Q05084 483 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 FSCN1Q16658 493 aaKnown RBP6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ALDH1L2Q3SY69 923 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 KIAA1755Q5JYT7 1200 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 CXCL17Q6UXB2 119 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 BNC2Q6ZN30 1099 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-207ENST00000467273 FAM214BQ7L5A3 538 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 SULF2Q8IWU5 870 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ADHFE1Q8IWW8 467 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 REPS2Q8NFH8 660 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 GRIN3AQ8TCU5 1115 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 CCDC17Q96LX7 622 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 TGS1Q96RS0 853 aaKnown RBP6.49□□□□□ -1.37
PTCD3-207ENST00000467273 NT5C1AQ9BXI3 368 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 KATNBL1Q9H079 304 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 AP5M1Q9H0R1 490 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 TRPV6Q9H1D0 765 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 ALDH8A1Q9H2A2 487 aaPredicted RBP6.49□□□□□ -1.37
PTCD3-207ENST00000467273 CERS4Q9HA82 394 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 PRDM16Q9HAZ2 1276 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 SAMM50Q9Y512 469 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 NAV1Q8NEY1 1877 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 GRIN2DO15399 1336 aa6.49□□□□□ -1.37
PTCD3-207ENST00000467273 DCHS1Q96JQ0 3298 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 MYO5AQ9Y4I1 1855 aaKnown RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 PROB1E7EW31 1015 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 MPHOSPH10O00566 681 aaKnown RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 NCK2O43639 380 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 EFCAB14O75071 495 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 GNAI3P08754 354 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 ARNTP27540 789 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 GDNFP39905 211 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 KCNJ6P48051 423 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 NASPP49321 788 aaPredicted RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 DYNLL1P63167 89 aaKnown RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 PTPROQ16827 1216 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 TIGD5Q53EQ6 642 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 TTC39AQ5SRH9 613 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 SNRNP48Q6IEG0 339 aaKnown RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 ARMCX2Q7L311 632 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 TLK2Q86UE8 772 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 RNF214Q8ND24 703 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 CHST13Q8NET6 341 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 PRSS33Q8NF86 280 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 FBXO27Q8NI29 283 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 PABPC5Q96DU9 382 aaKnown RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 MRPL38Q96DV4 380 aaKnown RBP6.48□□□□□ -1.37
PTCD3-207ENST00000467273 SCLYQ96I15 445 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 CBX8Q9HC52 389 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 ATP13A1Q9HD20 1204 aa6.48□□□□□ -1.37
PTCD3-207ENST00000467273 ASB14A6NK59 587 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 ETV2O00321 342 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-207ENST00000467273 F13A1P00488 732 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 IQCF3P0C7M6 154 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 OAZ1P54368 228 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 LINC00310P59036 64 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 BEX3Q00994 111 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 PTPN11Q06124 597 aaPredicted RBP6.47□□□□□ -1.37
PTCD3-207ENST00000467273 APOBRQ0VD83 1088 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 G3BP1Q13283 466 aaKnown RBP eCLIP6.47□□□□□ -1.37
PTCD3-207ENST00000467273 BFSP2Q13515 415 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SEPT6Q14141 434 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 IQSEC1Q6DN90 963 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 DEFB128Q7Z7B8 93 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SUGP1Q8IWZ8 645 aaKnown RBP6.47□□□□□ -1.37
PTCD3-207ENST00000467273 CCDC144CPQ8IYA2 1237 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SPICE1Q8N0Z3 855 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 ANKRD35Q8N283 1001 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 PRPF38AQ8NAV1 312 aaKnown RBP6.47□□□□□ -1.37
PTCD3-207ENST00000467273 GDPD5Q8WTR4 605 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SSH1Q8WYL5 1049 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 EDAQ92838 391 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 RELTQ969Z4 430 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SEC16BQ96JE7 1060 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 C20orf173Q96LM9 149 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SAMD11Q96NU1 681 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 RAD9AQ99638 391 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 SLF1Q9BQI6 1058 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 CRNKL1Q9BZJ0 848 aaKnown RBP6.47□□□□□ -1.37
PTCD3-207ENST00000467273 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 KANSL2Q9H9L4 492 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 CYP8B1Q9UNU6 501 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 MCM3APO60318 1980 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 ASTN1O14525 1302 aa6.47□□□□□ -1.37
PTCD3-207ENST00000467273 PTPRSQ13332 1948 aa6.46□□□□□ -1.37
PTCD3-207ENST00000467273 MYO15AQ9UKN7 3530 aa6.46□□□□□ -1.37
PTCD3-207ENST00000467273 LOC102724159A0A0B4J2E5 919 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 KPNA6O60684 536 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 IDH1O75874 414 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 GJB5O95377 273 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 CPT1AP50416 773 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 WDR5P61964 334 aaKnown RBP6.46□□□□□ -1.38
PTCD3-207ENST00000467273 ZNF252P-AS1Q0IIN9 211 aa6.46□□□□□ -1.38
PTCD3-207ENST00000467273 TCF15Q12870 199 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms