RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 UBN1Q9NPG3 1134 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 RBBP6Q7Z6E9 1792 aaKnown RBP16.7■□□□□ 0.26
CHD1L-205ENST00000467213 TRAFD1O14545 582 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-205ENST00000467213 GCNT3O95395 438 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 ZNF211Q13398 564 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-205ENST00000467213 LENG9Q96B70 501 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 ZHX3Q9H4I2 956 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 AAASQ9NRG9 546 aa16.7■□□□□ 0.26
CHD1L-205ENST00000467213 DBR1Q9UK59 544 aaKnown RBP16.7■□□□□ 0.26
CHD1L-205ENST00000467213 ANKRD33BA6NCL7 494 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 TP73O15350 636 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 HNRNPCL1O60812 293 aaKnown RBP16.69■□□□□ 0.26
CHD1L-205ENST00000467213 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-205ENST00000467213 FESP07332 822 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 ABCB4P21439 1286 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 IFNAR2P48551 515 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 CCNHP51946 323 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-205ENST00000467213 GRAPQ13588 217 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 LBRQ14739 615 aaKnown RBP16.69■□□□□ 0.26
CHD1L-205ENST00000467213 SGSM1Q2NKQ1 1148 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 GRAPLQ8TC17 118 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-205ENST00000467213 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 CYP3A4P08684 503 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 ABHD2P08910 425 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 GCKP35557 465 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 SREBF1P36956 1147 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 PSMC6P62333 389 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 ARHGAP4P98171 946 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.267e-9■■■□□ 15.7
CHD1L-205ENST00000467213 PTK6Q13882 451 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 WASHC2DQ5SRD0 308 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 CHADLQ6NUI6 762 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 ERICH1Q86X53 443 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 NAF1Q96HR8 494 aaKnown RBP16.69■□□□□ 0.26
CHD1L-205ENST00000467213 RNPEPL1Q9HAU8 725 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 GPCPD1Q9NPB8 672 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 EURLQ9NYK6 297 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 VAV3Q9UKW4 847 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 FRMD4BQ9Y2L6 1034 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 SUGT1Q9Y2Z0 365 aa16.69■□□□□ 0.26
CHD1L-205ENST00000467213 MAPK13O15264 365 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 AHCYL1O43865 530 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 HIP1RO75146 1068 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 CYP1A2P05177 515 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 CALB2P22676 271 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 MYL7Q01449 175 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 BBOF1Q8ND07 529 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 GRK7Q8WTQ7 553 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 KRT35Q92764 455 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 CTTNBP2NLQ9P2B4 639 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 RABGAP1Q9Y3P9 1069 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 CD2APQ9Y5K6 639 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 SORBS3O60504 671 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 CDH16O75309 829 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 COPB2P35606 906 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 MRPS35P82673 323 aaKnown RBP16.68■□□□□ 0.26
CHD1L-205ENST00000467213 DDB1Q16531 1140 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 RINT1Q6NUQ1 792 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 HS2ST1Q7LGA3 356 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
CHD1L-205ENST00000467213 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 GJA10Q969M2 543 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 SNF8Q96H20 258 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 TAS2R14Q9NYV8 317 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 ZFATQ9P243 1243 aa16.68■□□□□ 0.26
CHD1L-205ENST00000467213 MEIS2O14770 477 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
CHD1L-205ENST00000467213 FTLP02792 175 aaPredicted RBP16.67■□□□□ 0.26
CHD1L-205ENST00000467213 COMTP21964 271 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 STAT4Q14765 748 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
CHD1L-205ENST00000467213 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
CHD1L-205ENST00000467213 STRA6Q9BX79 667 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 AKR1B1P15121 316 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 STAT3P40763 770 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 RASSF2P50749 326 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 RWDD2BP57060 319 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 NAIF1Q69YI7 327 aaPredicted RBP16.67■□□□□ 0.26
CHD1L-205ENST00000467213 CGB2Q6NT52 195 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 C1orf186Q6ZWK4 172 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 C12orf56Q8IXR9 622 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 ANKRD35Q8N283 1001 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 MKL1Q969V6 931 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 FIZ1Q96SL8 496 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 TLE6Q9H808 572 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 DNAJC18Q9H819 358 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 CD209Q9NNX6 404 aa16.67■□□□□ 0.26
CHD1L-205ENST00000467213 USP17L10C9JJH3 530 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 PYGMP11217 842 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 IVDP26440 423 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
CHD1L-205ENST00000467213 BFSP1Q12934 665 aa16.66■□□□□ 0.26
CHD1L-205ENST00000467213 RASA2Q15283 850 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms