RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SORCS3Q9UPU3 1222 aa6.29□□□□□ -1.4
PRPF40A-205ENST00000467114 RECQL4O94761 1208 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 SEC24DO94855 1032 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 LY86O95711 162 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 ABHD16AO95870 558 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 CFBP00751 764 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 PFKMP08237 780 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 ZFP36P26651 326 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 LSSP48449 732 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 WNT3AP56704 352 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 PTPAQ15257 358 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 GPR158Q5T848 1215 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 GLB1L3Q8NCI6 653 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 CPT1CQ8TCG5 803 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 PROKR1Q8TCW9 393 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 ZNF496Q96IT1 587 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 CPPED1Q9BRF8 314 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 BRINP2Q9C0B6 783 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 SPTLC3Q9NUV7 552 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 PACSIN3Q9UKS6 424 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 COL4A3Q01955 1670 aa6.28□□□□□ -1.4
PRPF40A-205ENST00000467114 NEMP1O14524 444 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 BMP5P22003 454 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 SOX5P35711 763 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 ID4P47928 161 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 MRPL49Q13405 166 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 ZBTB41Q5SVQ8 909 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 LHFPL2Q6ZUX7 228 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 ESPNLQ6ZVH7 1005 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 DDX46Q7L014 1031 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 DOK3Q7L591 496 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 TAS1R1Q7RTX1 841 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 FAM83AQ86UY5 434 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 FDXACB1Q9BRP7 624 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 CPEB1Q9BZB8 566 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 EMC7Q9NPA0 242 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 MSRAQ9UJ68 235 aa6.27□□□□□ -1.41
PRPF40A-205ENST00000467114 GRID2IPA4D2P6 1211 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 ZEB2O60315 1214 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 SCAF4O95104 1147 aaKnown RBP6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 FKBP9O95302 570 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 GYPEP15421 78 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 CASRP41180 1078 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 GPR15P49685 360 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 PHC1P78364 1004 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 VPS72Q15906 364 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 CCDC178Q5BJE1 867 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 KCNV1Q6PIU1 500 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 FKBP9P1Q75LS8 142 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 OR5M3Q8NGP4 307 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 GPR150Q8NGU9 434 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 OR2W6PQ8NHA6 318 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 IL17RAQ96F46 866 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 LSM14BQ9BX40 385 aaKnown RBP6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 KCNH6Q9H252 994 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 THG1LQ9NWX6 298 aaKnown RBP6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 PHLDB1Q86UU1 1377 aa6.26□□□□□ -1.41
PRPF40A-205ENST00000467114 ST20-MTHFSA0A0A6YYL1 179 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 LMNAP02545 664 aaKnown RBP6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 SCNN1BP51168 640 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 RNF187Q5TA31 235 aaPredicted RBP6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 IQSEC1Q6DN90 963 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 DPY19L2P1Q6NXN4 242 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 GAB3Q8WWW8 586 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 FERMT2Q96AC1 680 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 MYEOVQ96EZ4 313 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 NDC1Q9BTX1 674 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 SLC46A2Q9BY10 475 aa6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 ZNF768Q9H5H4 540 aaKnown RBP6.25□□□□□ -1.41
PRPF40A-205ENST00000467114 A0A1W2PR48 441 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 NRP2O60462 931 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 GZMKP49863 264 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 KPNA1P52294 538 aaPredicted RBP6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 TERF2Q15554 542 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 TIGD2Q4W5G0 525 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 DDX42Q86XP3 938 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 MSL3Q8N5Y2 521 aaKnown RBP6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 ZNF610Q8N9Z0 462 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 EPC1Q9H2F5 836 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 IFT22Q9H7X7 185 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 PCDH12Q9NPG4 1184 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 USP18Q9UMW8 372 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 NUMBLQ9Y6R0 609 aa6.24□□□□□ -1.41
PRPF40A-205ENST00000467114 GPR39O43194 453 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 B3GALT2O43825 422 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 LAG3P18627 525 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 FBLP22087 321 aaKnown RBP6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 XPAP23025 273 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 STRN3Q13033 797 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 STAT4Q14765 748 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 GPRIN1Q7Z2K8 1008 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 GPR101Q96P66 508 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 FAM193BQ96PV7 902 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 TOR3AQ9H497 397 aa6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 EIF2B4Q9UI10 523 aaKnown RBP6.23□□□□□ -1.41
PRPF40A-205ENST00000467114 TMPRSS11EQ9UL52 423 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms