RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 CD69Q07108 199 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 DDB1Q16531 1140 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 MAN2A1Q16706 1144 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 HDGFL2Q7Z4V5 671 aaPredicted RBP4.92□□□□□ -1.62
CCDC58-203ENST00000466854 THNSL2Q86YJ6 484 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 UNC5BQ8IZJ1 945 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 FERMT2Q96AC1 680 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 HIST1H2AHQ96KK5 128 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 TTC1Q99614 292 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 HIST1H2AJQ99878 128 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 FDXACB1Q9BRP7 624 aaPredicted RBP4.92□□□□□ -1.62
CCDC58-203ENST00000466854 CPEB1Q9BZB8 566 aaKnown RBP4.92□□□□□ -1.62
CCDC58-203ENST00000466854 MS4A5Q9H3V2 200 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 MSRAQ9UJ68 235 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 FZD1Q9UP38 647 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 NOC2LQ9Y3T9 749 aaKnown RBP4.92□□□□□ -1.62
CCDC58-203ENST00000466854 MYPNQ86TC9 1320 aa4.92□□□□□ -1.62
CCDC58-203ENST00000466854 ST20-MTHFSA0A0A6YYL1 179 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 GRID2IPA4D2P6 1211 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 NEMP1O14524 444 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 HOXA3O43365 443 aaPredicted RBP4.91□□□□□ -1.62
CCDC58-203ENST00000466854 ALDH1A2O94788 518 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 SEC24DO94855 1032 aaPredicted RBP4.91□□□□□ -1.62
CCDC58-203ENST00000466854 LY86O95711 162 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 ADRA1BP35368 520 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 ID4P47928 161 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 LRRC32Q14392 662 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 BROXQ5VW32 411 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 LRRC55Q6ZSA7 311 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 ESPNLQ6ZVH7 1005 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 STRA8Q7Z7C7 330 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 GPR150Q8NGU9 434 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 ZNF496Q96IT1 587 aaPredicted RBP4.91□□□□□ -1.62
CCDC58-203ENST00000466854 CRAMP1Q96RY5 1269 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 ANO3Q9BYT9 981 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 IFT22Q9H7X7 185 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 EMC7Q9NPA0 242 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 KCNG1Q9UIX4 513 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 USP18Q9UMW8 372 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 PCDHB6Q9Y5E3 794 aa4.91□□□□□ -1.62
CCDC58-203ENST00000466854 NRP1O14786 923 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 ITGB1P05556 798 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 PFKMP08237 780 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 CASRP41180 1078 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 DHCR24Q15392 516 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 EGFLAMQ63HQ2 1017 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 RNF180Q86T96 592 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 MSL3Q8N5Y2 521 aaKnown RBP4.9□□□□□ -1.63
CCDC58-203ENST00000466854 OR52N2Q8NGI0 321 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 PROKR1Q8TCW9 393 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 SLC5A5Q92911 643 aa4.9□□□□□ -1.63
CCDC58-203ENST00000466854 LSM14BQ9BX40 385 aaKnown RBP4.9□□□□□ -1.63
CCDC58-203ENST00000466854 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.63
CCDC58-203ENST00000466854 AHRRA9YTQ3 701 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 TRIM24O15164 1050 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 GCP02774 474 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 CLEC2LP0C7M8 214 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 CPEP16870 476 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 BMP5P22003 454 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 TERF2Q15554 542 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 FRMD7Q6ZUT3 714 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 FAM9AQ8IZU1 332 aaPredicted RBP4.89□□□□□ -1.63
CCDC58-203ENST00000466854 SYNE4Q8N205 404 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 CDYL2Q8N8U2 506 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 ATL2Q8NHH9 583 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 CPPED1Q9BRF8 314 aaPredicted RBP4.89□□□□□ -1.63
CCDC58-203ENST00000466854 PDCD2LQ9BRP1 358 aa4.89□□□□□ -1.63
CCDC58-203ENST00000466854 EIF4G1Q04637 1599 aaKnown RBP4.89□□□□□ -1.63
CCDC58-203ENST00000466854 POLR2AP24928 1970 aaKnown RBP4.89□□□□□ -1.63
CCDC58-203ENST00000466854 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.88□□□□□ -1.63
CCDC58-203ENST00000466854 ZEB2O60315 1214 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 KDM1AO60341 852 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 SCAF4O95104 1147 aaKnown RBP4.88□□□□□ -1.63
CCDC58-203ENST00000466854 ABHD16AO95870 558 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 FAM189BP81408 668 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 TMPRSS15P98073 1019 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 MRPL49Q13405 166 aaKnown RBP4.88□□□□□ -1.63
CCDC58-203ENST00000466854 METTL24Q5JXM2 366 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 LY6G5CQ5SRR4 150 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 RNF187Q5TA31 235 aaPredicted RBP4.88□□□□□ -1.63
CCDC58-203ENST00000466854 IQSEC1Q6DN90 963 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 USP36Q9P275 1121 aaKnown RBP4.88□□□□□ -1.63
CCDC58-203ENST00000466854 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.88□□□□□ -1.63
CCDC58-203ENST00000466854 COL4A3Q01955 1670 aa4.88□□□□□ -1.63
CCDC58-203ENST00000466854 A0A1W2PR48 441 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 DNAJC6O75061 913 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 PPFIA2O75334 1257 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 ULK1O75385 1050 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 LMNAP02545 664 aaKnown RBP4.87□□□□□ -1.63
CCDC58-203ENST00000466854 BPIP17213 487 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 XPAP23025 273 aaPredicted RBP4.87□□□□□ -1.63
CCDC58-203ENST00000466854 APOBEC3AP31941 199 aaPredicted RBP4.87□□□□□ -1.63
CCDC58-203ENST00000466854 PHC1P78364 1004 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 VPS72Q15906 364 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 CSRP2Q16527 193 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 GPR158Q5T848 1215 aa4.87□□□□□ -1.63
CCDC58-203ENST00000466854 CCDC62Q6P9F0 684 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms