RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TEKT3Q9BXF9 490 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 PRKD2Q9BZL6 878 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 PLEKHA4Q9H4M7 779 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 PIDD1Q9HB75 910 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 CHST7Q9NS84 486 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 ZDHHC7Q9NXF8 308 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 FBXO4Q9UKT5 387 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 CACNA1IQ9P0X4 2223 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 SPTLC1O15269 473 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 C1RP00736 705 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 SDHBP21912 280 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 GPC5P78333 572 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 LILRA6Q6PI73 481 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 B3GNT9Q6UX72 402 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 RDM1Q8NG50 284 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 FGF14Q92915 247 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 SHDQ96IW2 340 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 NCDNQ9UBB6 729 aa16.22■□□□□ 0.19
CXCR4-203ENST00000466288 DOCK8Q8NF50 2099 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 KANSL1LA0AUZ9 987 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 F8W810 466 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 TGM5O43548 720 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 GAS2O43903 313 aaKnown RBP16.21■□□□□ 0.19
CXCR4-203ENST00000466288 PSMD10O75832 226 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 GNA11P29992 359 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 OR1G1P47890 313 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 RCAN1P53805 252 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 DSC1Q08554 894 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 SNW1Q13573 536 aaKnown RBP16.21■□□□□ 0.19
CXCR4-203ENST00000466288 PARM1Q6UWI2 310 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 DHX32Q7L7V1 743 aaKnown RBP16.21■□□□□ 0.19
CXCR4-203ENST00000466288 GPR161Q8N6U8 529 aaKnown RBP16.21■□□□□ 0.19
CXCR4-203ENST00000466288 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.19
CXCR4-203ENST00000466288 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 MINDY3Q9H8M7 445 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 SPATA6Q9NWH7 488 aaPredicted RBP16.21■□□□□ 0.19
CXCR4-203ENST00000466288 PCDHGA2Q9Y5H1 932 aa16.21■□□□□ 0.19
CXCR4-203ENST00000466288 SPTBN2O15020 2390 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 LAMTOR5O43504 91 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 NCLP19338 710 aaKnown RBP16.2■□□□□ 0.18
CXCR4-203ENST00000466288 ANO5Q75V66 913 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 MIER3Q7Z3K6 550 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 ZBTB44Q8NCP5 570 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 SMG8Q8ND04 991 aaKnown RBP16.2■□□□□ 0.18
CXCR4-203ENST00000466288 PHKBQ93100 1093 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 ESYT1Q9BSJ8 1104 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 BCO2Q9BYV7 579 aa16.2■□□□□ 0.18
CXCR4-203ENST00000466288 MTF2Q9Y483 593 aaPredicted RBP16.2■□□□□ 0.18
CXCR4-203ENST00000466288 ZFP37Q9Y6Q3 630 aaPredicted RBP16.2■□□□□ 0.18
CXCR4-203ENST00000466288 DDX11L8A8MPP1 907 aa16.19■□□□□ 0.18
CXCR4-203ENST00000466288 USP11P51784 963 aa16.19■□□□□ 0.18
CXCR4-203ENST00000466288 C1QBPQ07021 282 aaKnown RBP16.19■□□□□ 0.18
CXCR4-203ENST00000466288 B3GALT6Q96L58 329 aa16.19■□□□□ 0.18
CXCR4-203ENST00000466288 UBN1Q9NPG3 1134 aa16.19■□□□□ 0.18
CXCR4-203ENST00000466288 MIOSQ9NXC5 875 aa16.19■□□□□ 0.18
CXCR4-203ENST00000466288 COL4A3BPQ9Y5P4 624 aa16.19■□□□□ 0.18
CXCR4-203ENST00000466288 ARL5CA6NH57 179 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 PRR5-ARHGAP8B1AHC4 643 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 TGM1P22735 817 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 FSHRP23945 695 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 ARHGAP8P85298 464 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 PRKCQQ04759 706 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 CSTF1Q05048 431 aaKnown RBP16.18■□□□□ 0.18
CXCR4-203ENST00000466288 MLF2Q15773 248 aaPredicted RBP16.18■□□□□ 0.18
CXCR4-203ENST00000466288 PLA2G4FQ68DD2 849 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 SRGAP1Q7Z6B7 1085 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 GPR65Q8IYL9 337 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 ATRIPQ8WXE1 791 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 NELL1Q92832 810 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 MBOAT7Q96N66 472 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 GAD1Q99259 594 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
CXCR4-203ENST00000466288 OSBPL6Q9BZF3 934 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 GPR62Q9BZJ7 368 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 EPC1Q9H2F5 836 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 ANO2Q9NQ90 1003 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.18■□□□□ 0.18
CXCR4-203ENST00000466288 FNIP2Q9P278 1114 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 COL4A3Q01955 1670 aa16.18■□□□□ 0.18
CXCR4-203ENST00000466288 WDR81Q562E7 1941 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 FAM170BA6NMN3 283 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
CXCR4-203ENST00000466288 LILRB5O75023 590 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 ZMYND10O75800 440 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 ITGA4P13612 1032 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 MLH1P40692 756 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 IRX6P78412 446 aaPredicted RBP16.17■□□□□ 0.18
CXCR4-203ENST00000466288 LMNB2Q03252 620 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 UBXN2BQ14CS0 331 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 ADCK5Q3MIX3 580 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 Q4G0T1 1027 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 SLC44A4Q53GD3 710 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 CNNM3Q8NE01 707 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 BICD2Q8TD16 824 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
CXCR4-203ENST00000466288 ZSCAN32Q9NX65 697 aa16.17■□□□□ 0.18
CXCR4-203ENST00000466288 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms