RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 EVPLQ92817 2033 aa19.82■□□□□ 0.76
COL9A3-205ENST00000466192 GARTP22102 1010 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 ABCD1P33897 745 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 TTLL4Q14679 1199 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 KIAA0753Q2KHM9 967 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 NOA1Q8NC60 698 aaKnown RBP19.81■□□□□ 0.76
COL9A3-205ENST00000466192 BBXQ8WY36 941 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-205ENST00000466192 CCDC127Q96BQ5 260 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 FAM167AQ96KS9 214 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 MFSD14AQ96MC6 490 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 NOX5Q96PH1 765 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 MMS19Q96T76 1030 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 PACSIN1Q9BY11 444 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 ZBTB42B2RXF5 422 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 SEC31AO94979 1220 aaKnown RBP19.81■□□□□ 0.76
COL9A3-205ENST00000466192 RHOXF2BP0C7M4 288 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 FERP16591 822 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 SOX5P35711 763 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 MXI1P50539 228 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 PLPPR4Q7Z2D5 763 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 DEPTORQ8TB45 409 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 SCFD2Q8WU76 684 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 POP1Q99575 1024 aaKnown RBP19.81■□□□□ 0.76
COL9A3-205ENST00000466192 RHOXF2Q9BQY4 288 aa19.81■□□□□ 0.76
COL9A3-205ENST00000466192 ZHX1Q9UKY1 873 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-205ENST00000466192 LRRIQ3A6PVS8 624 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-205ENST00000466192 PMM2O15305 246 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 EVI5O60447 810 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 ZBTB48P10074 688 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-205ENST00000466192 LIG4P49917 911 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 CETN1Q12798 172 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 STRN3Q13033 797 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 CAPSQ13938 189 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 GPD1LQ8N335 351 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 RNF10Q8N5U6 811 aaKnown RBP19.8■□□□□ 0.76
COL9A3-205ENST00000466192 OGFRQ9NZT2 677 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 SNX12Q9UMY4 172 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 DIS3Q9Y2L1 958 aaKnown RBP19.8■□□□□ 0.76
COL9A3-205ENST00000466192 TULP1O00294 542 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-205ENST00000466192 KLRC1P26715 233 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 TUBB4BP68371 445 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 CYP24A1Q07973 514 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 PLCB4Q15147 1175 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 TAPT1Q6NXT6 567 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 ARHGEF19Q8IW93 802 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 ATP8B4Q8TF62 1192 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 TRPM7Q96QT4 1865 aa19.8■□□□□ 0.76
COL9A3-205ENST00000466192 DOCK3Q8IZD9 2030 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 K7ERI5 159 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 MAP2K1Q02750 393 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-205ENST00000466192 ARHGAP44Q17R89 818 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 GJC2Q5T442 439 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-205ENST00000466192 CST9Q5W186 159 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 ABRAQ8N0Z2 381 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 TMC2Q8TDI7 906 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 PRPF31Q8WWY3 499 aaKnown RBP19.79■□□□□ 0.76
COL9A3-205ENST00000466192 PNKPQ96T60 521 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 PSMB7Q99436 277 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 FAM213AQ9BRX8 229 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 TOPORSQ9NS56 1045 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-205ENST00000466192 DAAM1Q9Y4D1 1078 aa19.79■□□□□ 0.76
COL9A3-205ENST00000466192 STRNO43815 780 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 EDN1P05305 212 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 SCP2P22307 547 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 RFX1P22670 979 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 ARHGAP1Q07960 439 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 MKRN4PQ13434 485 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-205ENST00000466192 NAB2Q15742 525 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 DNAAF5Q86Y56 855 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 OLIG1Q8TAK6 271 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 CAGE1Q8TC20 777 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 HAPLN2Q9GZV7 340 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 UBE2TQ9NPD8 197 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-205ENST00000466192 NAGPAQ9UK23 515 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 NENFQ9UMX5 172 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 PPME1Q9Y570 386 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 STYXL1Q9Y6J8 313 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 IVNS1ABPQ9Y6Y0 642 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 NCK2O43639 380 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 ZRANB2O95218 330 aaKnown RBP eCLIP19.78■□□□□ 0.76
COL9A3-205ENST00000466192 PIGRP01833 764 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 CC2D1AQ6P1N0 951 aaPredicted RBP19.78■□□□□ 0.76
COL9A3-205ENST00000466192 MAMDC4Q6UXC1 1216 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 MSANTD4Q8NCY6 345 aa19.78■□□□□ 0.76
COL9A3-205ENST00000466192 PDE2AO00408 941 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-205ENST00000466192 FOXN3O00409 490 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-205ENST00000466192 ANXA13P27216 316 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 CXCR5P32302 372 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 CKAP4Q07065 602 aaKnown RBP19.77■□□□□ 0.76
COL9A3-205ENST00000466192 KRT39Q6A163 491 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 NFRKBQ6P4R8 1299 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 ALKBH5Q6P6C2 394 aaKnown RBP19.77■□□□□ 0.76
COL9A3-205ENST00000466192 GPR142Q7Z601 462 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 COG1Q8WTW3 980 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 SEMA4DQ92854 862 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 ZBTB45Q96K62 511 aaPredicted RBP19.77■□□□□ 0.76
COL9A3-205ENST00000466192 PARK7Q99497 189 aaKnown RBP19.77■□□□□ 0.76
COL9A3-205ENST00000466192 SMARCAD1Q9H4L7 1026 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 SUGCTQ9HAC7 445 aa19.77■□□□□ 0.76
COL9A3-205ENST00000466192 DDX3XO00571 662 aaKnown RBP eCLIP19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms