RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 DDX3YO15523 660 aaKnown RBP17.63■□□□□ 0.41
SLX4-202ENST00000466154 CNGA1P29973 690 aa17.63■□□□□ 0.41
SLX4-202ENST00000466154 MAGOHBQ96A72 148 aaKnown RBP17.63■□□□□ 0.41
SLX4-202ENST00000466154 FAM213AQ9BRX8 229 aa17.63■□□□□ 0.41
SLX4-202ENST00000466154 DAAM1Q9Y4D1 1078 aa17.63■□□□□ 0.41
SLX4-202ENST00000466154 UBE4BO95155 1302 aa17.63■□□□□ 0.41
SLX4-202ENST00000466154 WDR46O15213 610 aaKnown RBP17.62■□□□□ 0.41
SLX4-202ENST00000466154 GJC1P36383 396 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 NPTX2P47972 431 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 KCNJ1P48048 391 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 PSMC5P62195 406 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 GPC5P78333 572 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 NBPF12Q5TAG4 269 aaPredicted RBP17.62■□□□□ 0.41
SLX4-202ENST00000466154 PCNX4Q63HM2 1172 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 B3GNT9Q6UX72 402 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 OLIG1Q8TAK6 271 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 TAS1R2Q8TE23 839 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 PDCD2LQ9BRP1 358 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 LRRC4CQ9HCJ2 640 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 INTUQ9ULD6 942 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 WDR64B1ANS9 1081 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 RPS6KA5O75582 802 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 SNRNP48Q6IEG0 339 aaKnown RBP17.62■□□□□ 0.41
SLX4-202ENST00000466154 NEK9Q8TD19 979 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 CALR3Q96L12 384 aaKnown RBP17.62■□□□□ 0.41
SLX4-202ENST00000466154 UBIAD1Q9Y5Z9 338 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 PEX10O60683 326 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 SNX1Q13596 522 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 UBL4BQ8N7F7 174 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 TATDN2Q93075 761 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 FMO2Q99518 471 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 NUP85Q9BW27 656 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 CCDC113Q9H0I3 377 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 SLC38A10Q9HBR0 1119 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 SYNPO2Q9UMS6 1093 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 NENFQ9UMX5 172 aa17.62■□□□□ 0.41
SLX4-202ENST00000466154 SHOX2O60902 331 aaPredicted RBP17.61■□□□□ 0.41
SLX4-202ENST00000466154 ZBTB7AO95365 584 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 ADSSP30520 456 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 LSP1P33241 339 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 HSPA9P38646 679 aaKnown RBP17.61■□□□□ 0.41
SLX4-202ENST00000466154 SSR1P43307 286 aaKnown RBP17.61■□□□□ 0.41
SLX4-202ENST00000466154 HMGCS2P54868 508 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 MTERF2Q49AM1 385 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 C1orf220Q5T0J3 134 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 ANO5Q75V66 913 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 FAM83AQ86UY5 434 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 CCDC105Q8IYK2 499 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 BSNDQ8WZ55 320 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 KREMEN1Q96MU8 473 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 TBX20Q9UMR3 447 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 DCDC2CA8MYV0 355 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 PPATQ06203 517 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 KIF22Q14807 665 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 RNF187Q5TA31 235 aaPredicted RBP17.61■□□□□ 0.41
SLX4-202ENST00000466154 DAB2IPQ5VWQ8 1189 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 LLGL2Q6P1M3 1020 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 PXMP2Q9NR77 195 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 FAM169AQ9Y6X4 670 aa17.61■□□□□ 0.41
SLX4-202ENST00000466154 TCRBV7S2A1N4TA0A589 114 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 PHF20L1A8MW92 1017 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 ANXA13P27216 316 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 KCTD17Q8N5Z5 321 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 EPS8L1Q8TE68 723 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 COL4A5P29400 1685 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 CES2O00748 559 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 SLCO1A2P46721 670 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 ZNF844Q08AG5 666 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 SEL1L2Q5TEA6 688 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 SLC9A9Q8IVB4 645 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 SLITRK6Q9H5Y7 841 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 TBC1D12O60347 775 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 ERLIN2O94905 339 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 PDE6CP51160 858 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 MAGOHP61326 146 aaKnown RBP17.6■□□□□ 0.41
SLX4-202ENST00000466154 BIRC3Q13489 604 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 NFIL3Q16649 462 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 ZFYVE27Q5T4F4 411 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 RHOT2Q8IXI1 618 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 RASGEF1CQ8N431 466 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 ZNF564Q8TBZ8 553 aaPredicted RBP17.6■□□□□ 0.41
SLX4-202ENST00000466154 PSMD1Q99460 953 aa17.6■□□□□ 0.41
SLX4-202ENST00000466154 DNAJC17Q9NVM6 304 aaKnown RBP17.6■□□□□ 0.41
SLX4-202ENST00000466154 NCANO14594 1321 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 MYO1FO00160 1098 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 NR3C2P08235 984 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 TNNI1P19237 187 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 MUTP22033 750 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 VPS41P49754 854 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 MFAP3P55082 362 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 PASD1Q8IV76 773 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 AGBL3Q8NEM8 1001 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 WRNIP1Q96S55 665 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 CEP89Q96ST8 783 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 STRA6Q9BX79 667 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 DEFB129Q9H1M3 183 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 TRIP13Q15645 432 aaPredicted RBP17.59■□□□□ 0.41
SLX4-202ENST00000466154 KRT39Q6A163 491 aa17.59■□□□□ 0.41
SLX4-202ENST00000466154 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms