RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 SF3B1O75533 1304 aaKnown RBP eCLIP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 CCDC151A5D8V7 595 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 MYO1FO00160 1098 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 ATP5BP06576 529 aaKnown RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 CDC25CP30307 473 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 SOX10P56693 466 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 EXOC3L4Q17RC7 722 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 SPECC1LQ69YQ0 1117 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 TMC6Q7Z403 805 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 MAP4K1Q92918 833 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 KIFC3Q9BVG8 833 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 PUS7LQ9H0K6 701 aaKnown RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 OSBPL3Q9H4L5 887 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 AGO2Q9UKV8 859 aaKnown RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 ZNF510Q9Y2H8 683 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 USP20Q9Y2K6 914 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 PCDHB5Q9Y5E4 795 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 CEMIPQ8WUJ3 1361 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 MEI4A8MW99 385 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 MYL4P12829 197 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 PAPOLAP51003 745 aaKnown RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 HIRAP54198 1017 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 RPS6P62753 249 aaKnown RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 TSTA3Q13630 321 aaPredicted RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 TFDP2Q14188 446 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 NOL9Q5SY16 702 aaKnown RBP10.12□□□□□ -0.79
SCAF11-205ENST00000465950 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 NFRKBQ6P4R8 1299 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 RABEPKQ7Z6M1 372 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 ERICH1Q86X53 443 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 ATP8B4Q8TF62 1192 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 PRRX2Q99811 253 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 SCUBE2Q9NQ36 999 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 HOMER3Q9NSC5 361 aa10.12□□□□□ -0.79
SCAF11-205ENST00000465950 MEGF6O75095 1541 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 SLIT2O94813 1529 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 SYNJ2BP-COX16A0A087WUM0 186 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 ASMTLO95671 621 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 CYP2C8P10632 490 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 APBA1Q02410 837 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 THOC5Q13769 683 aaKnown RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 GRIK4Q16099 956 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 RNF187Q5TA31 235 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 PXYLP1Q8TE99 480 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 SH3KBP1Q96B97 665 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 NSRP1Q9H0G5 558 aaKnown RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 FBXO44Q9H4M3 255 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 NLRC4Q9NPP4 1024 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 COX16Q9P0S2 106 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 ZSWIM5Q9P217 1185 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 MID2Q9UJV3 735 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 Q9Y3F1 56 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 A0A0D9SFI3 127 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 FZD9O00144 591 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 EYA4O95677 639 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 NPY2RP49146 381 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 RTP1P59025 263 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 PRKCEQ02156 737 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 ACBD5Q5T8D3 534 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 MTSS1LQ765P7 747 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 UNC45BQ8IWX7 931 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 NELFBQ8WX92 580 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 GJA10Q969M2 543 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 TRIM7Q9C029 511 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 CWC15Q9P013 229 aaKnown RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 H3BRJ5 948 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 KIAA0754O94854 1291 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 USP41Q3LFD5 358 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 METTL3Q86U44 580 aaKnown RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 TRPM4Q8TD43 1214 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 VWA5AO00534 786 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 IRF6O14896 467 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 NR2F2P24468 414 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 PCNX4Q63HM2 1172 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 RWDD4Q6NW29 188 aaKnown RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 HPS3Q969F9 1004 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 ABI2Q9NYB9 513 aaPredicted RBP10.11□□□□□ -0.79
SCAF11-205ENST00000465950 WDR35Q9P2L0 1181 aa10.11□□□□□ -0.79
SCAF11-205ENST00000465950 SLC10A3P09131 477 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 PMLP29590 882 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ALDH5A1P51649 535 aaPredicted RBP10.1□□□□□ -0.79
SCAF11-205ENST00000465950 LRRC63Q05C16 580 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 PTK2BQ14289 1009 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 CCDC157Q569K6 752 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 PPP4R1Q8TF05 950 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 VPS39Q96JC1 886 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 A0A087WZ62 844 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ATP1A1P05023 1023 aaKnown RBP10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ZNF445P59923 1031 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 MRPS6P82932 125 aaKnown RBP10.1□□□□□ -0.79
SCAF11-205ENST00000465950 SGCGQ13326 291 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 CRY2Q49AN0 593 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ASAP3Q8TDY4 903 aa10.1□□□□□ -0.79
SCAF11-205ENST00000465950 ARHGEF26Q96DR7 871 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms