RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 NXF3Q9H4D5 531 aaKnown RBP8.51□□□□□ -1.05
THBS3-205ENST00000465596 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
THBS3-205ENST00000465596 MTUS1Q9ULD2 1270 aa8.51□□□□□ -1.05
THBS3-205ENST00000465596 HES2Q9Y543 173 aa8.51□□□□□ -1.05
THBS3-205ENST00000465596 PCDHB7Q9Y5E2 793 aa8.51□□□□□ -1.05
THBS3-205ENST00000465596 NOTCH4Q99466 2003 aa8.51□□□□□ -1.05
THBS3-205ENST00000465596 DENND4CQ5VZ89 1909 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 GRM6O15303 877 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 SLC16A4O15374 487 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 ERLIN2O94905 339 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 ITGB1P05556 798 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 ZSCAN20P17040 1043 aaPredicted RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 BMPR1AP36894 532 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 EFNA5P52803 228 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 DSC1Q08554 894 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 BTG3Q14201 252 aaPredicted RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 BECN1Q14457 450 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 PPP2R5AQ15172 486 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 ZRSR1Q15695 479 aaKnown RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 TWF2Q6IBS0 349 aaKnown RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 SLC39A4Q6P5W5 647 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 NOTUMQ6P988 496 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 SLC27A1Q6PCB7 646 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 TMEM173Q86WV6 379 aaPredicted RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 HELQQ8TDG4 1101 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 P2RX5Q93086 422 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 CDK5RAP3Q96JB5 506 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 ACO2Q99798 780 aaKnown RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 VN1R3Q9BXE9 311 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 CDT1Q9H211 546 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 ST6GALNAC4Q9H4F1 302 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 TYW1Q9NV66 732 aaKnown RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 TBC1D13Q9NVG8 400 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 PRMT7Q9NVM4 692 aaPredicted RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 DAXXQ9UER7 740 aaPredicted RBP8.5□□□□□ -1.05
THBS3-205ENST00000465596 PLAGL2Q9UPG8 496 aa8.5□□□□□ -1.05
THBS3-205ENST00000465596 OBSL1O75147 1896 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 TBKBP1A7MCY6 615 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 PTGESO14684 152 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 HOXA2O43364 376 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 DDHD2O94830 711 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 PIGRP01833 764 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 RB1P06400 928 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 FOSL2P15408 326 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 PBX3P40426 434 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 CASP5P51878 434 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 GTF2BQ00403 316 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 DMP1Q13316 513 aaPredicted RBP8.49□□□□□ -1.05
THBS3-205ENST00000465596 PRPF4BQ13523 1007 aaKnown RBP8.49□□□□□ -1.05
THBS3-205ENST00000465596 MAPK6Q16659 721 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 LONRF3Q496Y0 759 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 XKR4Q5GH76 650 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 ZNF280BQ86YH2 543 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 ZBTB8OSQ8IWT0 167 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 RNF168Q8IYW5 571 aaPredicted RBP8.49□□□□□ -1.05
THBS3-205ENST00000465596 LRRC43Q8N309 656 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 CEP120Q8N960 986 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 COLGALT1Q8NBJ5 622 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 FBXO22Q8NEZ5 403 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 MAFAQ8NHW3 353 aaPredicted RBP8.49□□□□□ -1.05
THBS3-205ENST00000465596 RSPH1Q8WYR4 309 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 DDX12PQ92771 950 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 IFT74Q96LB3 600 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 ZFP42Q96MM3 310 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 IKZF4Q9H2S9 585 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 GOLPH3LQ9H4A5 285 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 NRDE2Q9H7Z3 1164 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 KMT5AQ9NQR1 393 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 MIOSQ9NXC5 875 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 LMCD1Q9NZU5 365 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 DNAJB4Q9UDY4 337 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 TNFSF13BQ9Y275 285 aa8.49□□□□□ -1.05
THBS3-205ENST00000465596 GREB1Q4ZG55 1949 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 ARL5CA6NH57 179 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 FSCN2O14926 492 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 NPTXRO95502 500 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 SSBP05455 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
THBS3-205ENST00000465596 SKIP12755 728 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 PFKFB1P16118 471 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 CMA1P23946 247 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 CTNNB1P35222 781 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 HOXD13P35453 343 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 MLH1P40692 756 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 STAT6P42226 847 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 DHX8Q14562 1220 aaKnown RBP8.48□□□□□ -1.05
THBS3-205ENST00000465596 NOMO2Q5JPE7 1267 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 ATF7IP2Q5U623 682 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 RRAGBQ5VZM2 374 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 ADALQ6DHV7 355 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 ALKAL1Q6UXT8 129 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 CCDC73Q6ZRK6 1079 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 HAUS6Q7Z4H7 955 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 SFR1Q86XK3 245 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 MAP4K3Q8IVH8 894 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 SLC39A11Q8N1S5 342 aa8.48□□□□□ -1.05
THBS3-205ENST00000465596 PDILTQ8N807 584 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms