RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 IPO9Q96P70 1041 aaKnown RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 CASD1Q96PB1 797 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 TGS1Q96RS0 853 aaKnown RBP22.36■■□□□ 1.17
SKA3-205ENST00000465471 GOLPH3LQ9H4A5 285 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 SEL1LQ9UBV2 794 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 USP20Q9Y2K6 914 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 IPPQ9Y573 584 aa22.36■■□□□ 1.17
SKA3-205ENST00000465471 GAP43P17677 238 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 NDUFA8P51970 172 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 ATF7IP2Q5U623 682 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 AGMOQ6ZNB7 445 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 SFR1Q86XK3 245 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 FSIP1Q8NA03 581 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 RNF169Q8NCN4 708 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 LPPQ93052 612 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 PGBD4Q96DM1 585 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 FAM161BQ96MY7 647 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 ACO2Q99798 780 aaKnown RBP22.35■■□□□ 1.17
SKA3-205ENST00000465471 C7orf25Q9BPX7 421 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 MRPL4Q9BYD3 311 aaKnown RBP22.35■■□□□ 1.17
SKA3-205ENST00000465471 PTPRHQ9HD43 1115 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 OLFML3Q9NRN5 406 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 USP25Q9UHP3 1055 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 TNFSF13BQ9Y275 285 aa22.35■■□□□ 1.17
SKA3-205ENST00000465471 MRPL42Q9Y6G3 142 aaKnown RBP22.35■■□□□ 1.17
SKA3-205ENST00000465471 TBKBP1A7MCY6 615 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 K7ENM7 598 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 ABLIM1O14639 778 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 PPP1R37O75864 691 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 NPTXRO95502 500 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 LIG1P18858 919 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 PROZP22891 400 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 GTF2BQ00403 316 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 AMPD3Q01432 767 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 PAN2Q504Q3 1202 aaKnown RBP22.34■■□□□ 1.17
SKA3-205ENST00000465471 EEF1DP3Q658K8 133 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 FAM178BQ8IXR5 827 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 SLC17A8Q8NDX2 589 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 SAMD11Q96NU1 681 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 STRA6Q9BX79 667 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 NXF3Q9H4D5 531 aaKnown RBP22.34■■□□□ 1.17
SKA3-205ENST00000465471 ZHX3Q9H4I2 956 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 SERTAD1Q9UHV2 236 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 ZMYM2Q9UBW7 1377 aa22.34■■□□□ 1.17
SKA3-205ENST00000465471 EPOPA6NHQ4 379 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 INPPL1O15357 1258 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 NMT1P30419 496 aaKnown RBP22.33■■□□□ 1.17
SKA3-205ENST00000465471 SYKP43405 635 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 LONRF3Q496Y0 759 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 HELQQ8TDG4 1101 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 C17orf80Q9BSJ5 609 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 TARS2Q9BW92 718 aaKnown RBP22.33■■□□□ 1.17
SKA3-205ENST00000465471 RNF39Q9H2S5 420 aa22.33■■□□□ 1.17
SKA3-205ENST00000465471 C5orf67F2Z3F1 127 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 OFD1O75665 1012 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 PIGRP01833 764 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 ABCD1P33897 745 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 STRN3Q13033 797 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 DCAF4L1Q3SXM0 396 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 ZPBP2Q6X784 338 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 LRRC55Q6ZSA7 311 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 ZNF720Q7Z2F6 126 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 TMEM192Q8IY95 271 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 CEP57L1Q8IYX8 460 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 LRRC43Q8N309 656 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 TMEM87AQ8NBN3 555 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 ADPGKQ9BRR6 497 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 TRIM6Q9C030 488 aaPredicted RBP22.32■■□□□ 1.16
SKA3-205ENST00000465471 CWH43Q9H720 699 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 RSAD1Q9HA92 442 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 PANK4Q9NVE7 773 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 TBX20Q9UMR3 447 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 RWDD3Q9Y3V2 267 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 HES2Q9Y543 173 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 MYO9BQ13459 2157 aa22.32■■□□□ 1.16
SKA3-205ENST00000465471 ITGA4P13612 1032 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 IDEP14735 1019 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 EHHADHQ08426 723 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 COASYQ13057 564 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 EPC2Q52LR7 807 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 GLB1LQ6UWU2 654 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 MAP4K3Q8IVH8 894 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 CCDC65Q8IXS2 484 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 ABI1Q8IZP0 508 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 ARNTL2Q8WYA1 636 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 HVCN1Q96D96 273 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 PAGE5Q96GU1 130 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 CDX2Q99626 313 aaPredicted RBP22.31■■□□□ 1.16
SKA3-205ENST00000465471 MRPL9Q9BYD2 267 aaKnown RBP22.31■■□□□ 1.16
SKA3-205ENST00000465471 PRDM12Q9H4Q4 367 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 CERS4Q9HA82 394 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 UBN1Q9NPG3 1134 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 HCSTQ9UBK5 93 aa22.31■■□□□ 1.16
SKA3-205ENST00000465471 TOM1L1O75674 476 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 CASP1P29466 404 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 BMPR1AP36894 532 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 ASIC1P78348 528 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 CUL4BQ13620 913 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 TMEM132AQ24JP5 1023 aa22.3■■□□□ 1.16
SKA3-205ENST00000465471 HERC4Q5GLZ8 1057 aaPredicted RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms