RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 PNOCQ13519 176 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 SNW1Q13573 536 aaKnown RBP20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 LRIT3Q3SXY7 679 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 HABP4Q5JVS0 413 aaKnown RBP20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 CLEC17AQ6ZS10 378 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 TAS1R3Q7RTX0 852 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 SYCP3Q8IZU3 236 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 ENGASEQ8NFI3 743 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 PGBD4Q96DM1 585 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 PDZD7Q9H5P4 517 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 OLFML3Q9NRN5 406 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 TMEM161AQ9NX61 479 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 EXOC7Q9UPT5 735 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 PCDHB13Q9Y5F0 798 aa20.31■□□□□ 0.84
SCAMP3-204ENST00000465312 PVALEFA0A1B0GWK0 134 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 FRMD3A2A2Y4 597 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 RPN1P04843 607 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 FGFR1P11362 822 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 ITGA4P13612 1032 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 PBX2P40425 430 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 SMAD3P84022 425 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 ALCAMQ13740 583 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 NT5DC1Q5TFE4 455 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 CNNM4Q6P4Q7 775 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 ZNF720Q7Z2F6 126 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 LPPQ93052 612 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 RAD9AQ99638 391 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 ACO2Q99798 780 aaKnown RBP20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 PBX4Q9BYU1 374 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 NKX2-4Q9H2Z4 354 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 INPP5FQ9Y2H2 1132 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 INSL6Q9Y581 213 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 PCDHA11Q9Y5I1 949 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 GBF1Q92538 1859 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 TRIOBPQ9H2D6 2365 aa20.3■□□□□ 0.84
SCAMP3-204ENST00000465312 A0A1B0GUA9 196 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 TBKBP1A7MCY6 615 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 TULP1O00294 542 aaPredicted RBP20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 HOXA2O43364 376 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 SMC2O95347 1197 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 MYOGP15173 224 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 DNAJB2P25686 324 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 GATMP50440 423 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 BTG3Q14201 252 aaPredicted RBP20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 DCAF4L1Q3SXM0 396 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 SPOUT1Q5T280 376 aaKnown RBP20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 L1TD1Q5T7N2 865 aaKnown RBP20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 EEF1DP3Q658K8 133 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 HVCN1Q96D96 273 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 TIGD1Q96MW7 591 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 ACCSQ96QU6 501 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 FIZ1Q96SL8 496 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 ELAC1Q9H777 363 aaKnown RBP20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 SLC39A2Q9NP94 309 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 PARP2Q9UGN5 583 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 HES2Q9Y543 173 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 IPPQ9Y573 584 aa20.29■□□□□ 0.84
SCAMP3-204ENST00000465312 TTC3P53804 2025 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 PRPF6O94906 941 aaKnown RBP20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 EOMESO95936 686 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 CA3P07451 260 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 CASP5P51878 434 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 GTF2BQ00403 316 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 DPYDQ12882 1025 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 UBXN11Q5T124 520 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 PPP2R2DQ66LE6 453 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 MPZL3Q6UWV2 235 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 HELQQ8TDG4 1101 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 SMARCE1Q969G3 411 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 TIFAQ96CG3 184 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 FGFBP2Q9BYJ0 223 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 NXF3Q9H4D5 531 aaKnown RBP20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 SLC28A3Q9HAS3 691 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 TNFSF13BQ9Y275 285 aa20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 RANBP2P49792 3224 aaKnown RBP20.28■□□□□ 0.84
SCAMP3-204ENST00000465312 CLDN3O15551 220 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 TOM1L1O75674 476 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 OSTNP61366 133 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 FAM189BP81408 668 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 GLB1LQ6UWU2 654 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 ZPBP2Q6X784 338 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 MAP4K3Q8IVH8 894 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 NELFCDQ8IXH7 590 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 NOC3LQ8WTT2 800 aaKnown RBP20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 ERCC4Q92889 916 aaPredicted RBP20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 LRCH3Q96II8 777 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 ZBTB45Q96K62 511 aaPredicted RBP20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 TRAIPQ9BWF2 469 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 ST6GALNAC4Q9H4F1 302 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 LMBRD1Q9NUN5 540 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 GDAQ9Y2T3 454 aa20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 YBX2Q9Y2T7 364 aaKnown RBP20.27■□□□□ 0.84
SCAMP3-204ENST00000465312 SOX1O00570 391 aaPredicted RBP20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 KLRC4O43908 158 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 DGKIO75912 1065 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 AKAP5P24588 427 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 CAMK4Q16566 473 aa20.26■□□□□ 0.83
SCAMP3-204ENST00000465312 THNSL1Q8IYQ7 743 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms