RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 LIG1P18858 919 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 COASYQ13057 564 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 CUL4BQ13620 913 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 DCAF4L1Q3SXM0 396 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 UBXN11Q5T124 520 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 NT5DC1Q5TFE4 455 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 ATF7IP2Q5U623 682 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 TAS1R3Q7RTX0 852 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 ZNF598Q86UK7 904 aaKnown RBP18.61■□□□□ 0.57
USP39-211ENST00000465282 SP7Q8TDD2 431 aaPredicted RBP18.61■□□□□ 0.57
USP39-211ENST00000465282 CCDC47Q96A33 483 aaKnown RBP18.61■□□□□ 0.57
USP39-211ENST00000465282 YME1L1Q96TA2 773 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 ACO2Q99798 780 aaKnown RBP18.61■□□□□ 0.57
USP39-211ENST00000465282 STRA6Q9BX79 667 aa18.61■□□□□ 0.57
USP39-211ENST00000465282 TRIM6Q9C030 488 aaPredicted RBP18.61■□□□□ 0.57
USP39-211ENST00000465282 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 KINO60870 393 aaKnown RBP18.6■□□□□ 0.57
USP39-211ENST00000465282 GADD45BO75293 160 aaPredicted RBP18.6■□□□□ 0.57
USP39-211ENST00000465282 PRPF40AO75400 957 aaKnown RBP18.6■□□□□ 0.57
USP39-211ENST00000465282 PPP1R37O75864 691 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 PIGRP01833 764 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 DNAJB2P25686 324 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 NMT1P30419 496 aaKnown RBP18.6■□□□□ 0.57
USP39-211ENST00000465282 PSMD2Q13200 908 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 ZNF689Q96CS4 500 aaPredicted RBP18.6■□□□□ 0.57
USP39-211ENST00000465282 BLZF1Q9H2G9 400 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 PDZD7Q9H5P4 517 aa18.6■□□□□ 0.57
USP39-211ENST00000465282 ZMYM2Q9UBW7 1377 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 NR1I2O75469 434 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 TOM1L1O75674 476 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 GCNT3O95395 438 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 RABGGTBP53611 331 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 EHHADHQ08426 723 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 FAM117BQ6P1L5 589 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 TMCO2Q7Z6W1 182 aaPredicted RBP18.59■□□□□ 0.57
USP39-211ENST00000465282 MAP4K3Q8IVH8 894 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 CMTR2Q8IYT2 770 aaKnown RBP18.59■□□□□ 0.57
USP39-211ENST00000465282 ABI1Q8IZP0 508 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 TIFAQ96CG3 184 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 TARS2Q9BW92 718 aaKnown RBP18.59■□□□□ 0.57
USP39-211ENST00000465282 TMEM117Q9H0C3 514 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 SLC28A3Q9HAS3 691 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 RC3H2Q9HBD1 1191 aaKnown RBP18.59■□□□□ 0.57
USP39-211ENST00000465282 PTPRHQ9HD43 1115 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 EXOC7Q9UPT5 735 aa18.59■□□□□ 0.57
USP39-211ENST00000465282 RALGAPA2Q2PPJ7 1873 aa18.58■□□□□ 0.57
USP39-211ENST00000465282 TTLL13PA6NNM8 815 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 EIF3DO15371 548 aaKnown RBP eCLIP18.58■□□□□ 0.56
USP39-211ENST00000465282 EDN1P05305 212 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 ATF7P17544 494 aaPredicted RBP18.58■□□□□ 0.56
USP39-211ENST00000465282 PROZP22891 400 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 PBX2P40425 430 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 POSTNQ15063 836 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 FAM26FQ5R3K3 315 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 GLB1LQ6UWU2 654 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 MPZL3Q6UWV2 235 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 GRAMD1CQ8IYS0 662 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 BICD1Q96G01 975 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 ACCSQ96QU6 501 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 EIF2AQ9BY44 585 aaKnown RBP18.58■□□□□ 0.56
USP39-211ENST00000465282 TMEM206Q9H813 350 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 IPPQ9Y573 584 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 CHD9Q3L8U1 2897 aa18.58■□□□□ 0.56
USP39-211ENST00000465282 UBE4BO95155 1302 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 NLRC5Q86WI3 1866 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 HNRNPDLO14979 420 aaKnown RBP18.57■□□□□ 0.56
USP39-211ENST00000465282 CLDN3O15551 220 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 KLRC4O43908 158 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 NPTXRO95502 500 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 MCF2P10911 925 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 ITGA4P13612 1032 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 LIG4P49917 911 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 DPYDQ12882 1025 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 KYAT1Q16773 422 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
USP39-211ENST00000465282 SLFN12LQ6IEE8 588 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 SMG8Q8ND04 991 aaKnown RBP18.57■□□□□ 0.56
USP39-211ENST00000465282 SAMD11Q96NU1 681 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 TCHPQ9BT92 498 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 GTPBP4Q9BZE4 634 aaKnown RBP18.57■□□□□ 0.56
USP39-211ENST00000465282 EXOC1Q9NV70 894 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 TBC1D7Q9P0N9 293 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 YBX2Q9Y2T7 364 aaKnown RBP18.57■□□□□ 0.56
USP39-211ENST00000465282 GIT1Q9Y2X7 761 aa18.57■□□□□ 0.56
USP39-211ENST00000465282 CITO14578 2027 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
USP39-211ENST00000465282 CARNS1A5YM72 827 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 RBAK-RBAKDNI3L0D1 243 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 SOX1O00570 391 aaPredicted RBP18.56■□□□□ 0.56
USP39-211ENST00000465282 RPN1P04843 607 aaKnown RBP18.56■□□□□ 0.56
USP39-211ENST00000465282 CA3P07451 260 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 CASP1P29466 404 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 BTG3Q14201 252 aaPredicted RBP18.56■□□□□ 0.56
USP39-211ENST00000465282 KCNB1Q14721 858 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 ZNF568Q3ZCX4 644 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 ZC2HC1CQ53FD0 456 aaPredicted RBP18.56■□□□□ 0.56
USP39-211ENST00000465282 EEF1DP3Q658K8 133 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 FIBCD1Q8N539 461 aa18.56■□□□□ 0.56
USP39-211ENST00000465282 RNF169Q8NCN4 708 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms