RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TMC5Q6UXY8 1006 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 IFNLR1Q8IU57 520 aaPredicted RBP25.35■■□□□ 1.65
USP42-205ENST00000465073 IRF2BPLQ9H1B7 796 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 LIMD1Q9UGP4 676 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 IPPQ9Y573 584 aa25.35■■□□□ 1.65
USP42-205ENST00000465073 SSBP05455 408 aaKnown RBP eCLIP25.34■■□□□ 1.65
USP42-205ENST00000465073 CLCN4P51793 760 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 NUBP1P53384 320 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 GPR149Q86SP6 731 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 NECAB1Q8N987 351 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 SSX2IPQ9Y2D8 614 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 SPDYE4A6NLX3 237 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 INO80B-WBP1J3KQ70 363 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 DGAT1O75907 488 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 COLGALT2Q8IYK4 626 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 PHOX2BQ99453 314 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 EIF2AQ9BY44 585 aaKnown RBP25.34■■□□□ 1.65
USP42-205ENST00000465073 CSRNP2Q9H175 543 aa25.34■■□□□ 1.65
USP42-205ENST00000465073 TTC12Q9H892 705 aaPredicted RBP25.34■■□□□ 1.65
USP42-205ENST00000465073 ARL5CA6NH57 179 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 PDGFBP01127 241 aaPredicted RBP25.33■■□□□ 1.65
USP42-205ENST00000465073 SOD2P04179 222 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 URODP06132 367 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 ME3Q16798 604 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 GTF3C6Q969F1 213 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 GAD1Q99259 594 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 RNF39Q9H2S5 420 aa25.33■■□□□ 1.65
USP42-205ENST00000465073 ASGR2P07307 311 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 ARL2P36404 184 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 OTOP3Q7RTS5 596 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 HACE1Q8IYU2 909 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 ASAP3Q8TDY4 903 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 ACSF2Q96CM8 615 aaPredicted RBP25.32■■□□□ 1.64
USP42-205ENST00000465073 CPB2Q96IY4 423 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 CCDC43Q96MW1 224 aaKnown RBP25.32■■□□□ 1.64
USP42-205ENST00000465073 HERC2P3Q9BVR0 1158 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 NFKBIZQ9BYH8 718 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 MARCH5Q9NX47 278 aa25.32■■□□□ 1.64
USP42-205ENST00000465073 PRG3Q9Y2Y8 225 aaPredicted RBP25.32■■□□□ 1.64
USP42-205ENST00000465073 MYO10Q9HD67 2058 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 CACNA1HO95180 2353 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 KMT2EQ8IZD2 1858 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 BTBD18B2RXH4 712 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 NEMFO60524 1076 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 XRCC6P12956 609 aaKnown RBP eCLIP25.31■■□□□ 1.64
USP42-205ENST00000465073 MLH1P40692 756 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 TXKP42681 527 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 OR1G1P47890 313 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 MBTD1Q05BQ5 628 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 DSC1Q08554 894 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 CAPSQ13938 189 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 C15orf39Q6ZRI6 1047 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 CCDC149Q6ZUS6 474 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 RPS6KC1Q96S38 1066 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 TRIM6Q9C030 488 aaPredicted RBP25.31■■□□□ 1.64
USP42-205ENST00000465073 GIT1Q9Y2X7 761 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 HES2Q9Y543 173 aa25.31■■□□□ 1.64
USP42-205ENST00000465073 NR1I2O75469 434 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 NEFLP07196 543 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 ADH1AP07327 375 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 RARRES1P49788 294 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 TRIM29Q14134 588 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 AMHR2Q16671 573 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 DIS3L2Q8IYB7 885 aaKnown RBP25.3■■□□□ 1.64
USP42-205ENST00000465073 NSUN7Q8NE18 718 aaKnown RBP25.3■■□□□ 1.64
USP42-205ENST00000465073 MTMR9Q96QG7 549 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 DPP7Q9UHL4 492 aa25.3■■□□□ 1.64
USP42-205ENST00000465073 C2CD2LO14523 706 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 LARGE1O95461 756 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 EFEMP2O95967 443 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 ARF4P18085 180 aaPredicted RBP25.29■■□□□ 1.64
USP42-205ENST00000465073 GLRA2P23416 452 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 ELMSAN1Q6PJG2 1045 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 TAS1R1Q7RTX1 841 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 CMASQ8NFW8 434 aaPredicted RBP25.29■■□□□ 1.64
USP42-205ENST00000465073 FEZF2Q8TBJ5 459 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 SMOC2Q9H3U7 446 aa25.29■■□□□ 1.64
USP42-205ENST00000465073 GLUD2P49448 558 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 SCNN1GP51170 649 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 KIAA0319Q5VV43 1072 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 RNF168Q8IYW5 571 aaPredicted RBP25.28■■□□□ 1.64
USP42-205ENST00000465073 PIGOQ8TEQ8 1089 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 ZFP42Q96MM3 310 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 COLEC11Q9BWP8 271 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 APOL6Q9BWW8 343 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 RXFP1Q9HBX9 757 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 MIOSQ9NXC5 875 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 TEX28O15482 410 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 CYP26C1Q6V0L0 522 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 POLR3FQ9H1D9 316 aaPredicted RBP25.28■■□□□ 1.64
USP42-205ENST00000465073 NXF3Q9H4D5 531 aaKnown RBP25.28■■□□□ 1.64
USP42-205ENST00000465073 MAN1C1Q9NR34 630 aa25.28■■□□□ 1.64
USP42-205ENST00000465073 ARID2Q68CP9 1835 aa25.27■■□□□ 1.64
USP42-205ENST00000465073 WNT7AO00755 349 aa25.27■■□□□ 1.64
USP42-205ENST00000465073 GALR2O43603 387 aaPredicted RBP25.27■■□□□ 1.64
USP42-205ENST00000465073 DSG1Q02413 1049 aa25.27■■□□□ 1.64
USP42-205ENST00000465073 SLC27A1Q6PCB7 646 aa25.27■■□□□ 1.64
USP42-205ENST00000465073 ATOH1Q92858 354 aaPredicted RBP25.27■■□□□ 1.64
USP42-205ENST00000465073 RHOBTB2Q9BYZ6 727 aa25.27■■□□□ 1.64
USP42-205ENST00000465073 A0A1B0GUA9 196 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms