RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 GLT1D1Q96MS3 346 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TTC14Q96N46 770 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 CDX2Q99626 313 aaPredicted RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 OSBPL7Q9BZF2 842 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FAM107BQ9H098 131 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 SEMA6CQ9H3T2 930 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 ABHD16BQ9H3Z7 469 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 DEF6Q9H4E7 631 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 HELLSQ9NRZ9 838 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TOMM22Q9NS69 142 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 GEMIN8Q9NWZ8 242 aaKnown RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 TBX21Q9UL17 535 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 FRMPD2Q68DX3 1309 aaPredicted RBP6.38□□□□□ -1.39
CMTM1-207ENST00000465057 DOCK5Q9H7D0 1870 aa6.38□□□□□ -1.39
CMTM1-207ENST00000465057 CUL9Q8IWT3 2517 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SCN10AQ9Y5Y9 1956 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 ELP1O95163 1332 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 DCDC2CA8MYV0 355 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 TULP2O00295 520 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 CTAGE5O15320 804 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 ACRP10323 421 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 RAB6AP20340 208 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 CST5P28325 142 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 GSTT1P30711 240 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SLC16A2P36021 539 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 USP8P40818 1118 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 PDE1AP54750 535 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 GSDMDP57764 484 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SMAD3P84022 425 aaKnown RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SETQ01105 290 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 NMIQ13287 307 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 TTBK2Q6IQ55 1244 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SEZ6L2Q6UXD5 910 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 NSMFQ6X4W1 530 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 NOL8Q76FK4 1167 aaKnown RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 ANKRD33Q7Z3H0 272 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 TLK2Q86UE8 772 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SULF2Q8IWU5 870 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 FAM126BQ8IXS8 530 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SAMD3Q8N6K7 520 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SPC24Q8NBT2 197 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 MAFAQ8NHW3 353 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 STK35Q8TDR2 534 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 CHURC1Q8WUH1 139 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 GATA6Q92908 595 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 C16orf45Q96MC5 204 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 ZNF830Q96NB3 372 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 TOX2Q96NM4 488 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SRRTQ9BXP5 876 aaKnown RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 OSBPL1AQ9BXW6 950 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 TRIM5Q9C035 493 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 UPF3AQ9H1J1 476 aaKnown RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 RNF41Q9H4P4 317 aaPredicted RBP6.37□□□□□ -1.39
CMTM1-207ENST00000465057 PDGFCQ9NRA1 345 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 CRIM1Q9NZV1 1036 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 ANAPC4Q9UJX5 808 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 CCPG1Q9ULG6 757 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 SMC3Q9UQE7 1217 aa6.37□□□□□ -1.39
CMTM1-207ENST00000465057 COL4A4P53420 1690 aaPredicted RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 NEDD4P46934 1319 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 UMODL1Q5DID0 1318 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 MROH7Q68CQ1 1323 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 B4DLN1 442 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 ARVCFO00192 962 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 NFIBO00712 420 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 ORC4O43929 436 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 TIMP1P01033 207 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 FGAP02671 866 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 P4HBP07237 508 aaKnown RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 FGRP09769 529 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 HSPD1P10809 573 aaKnown RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 FOSL2P15408 326 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 CSF2RAP15509 400 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 NME2P22392 152 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 ARNTP27540 789 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 CYP2C18P33260 490 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 NOVP48745 357 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 CDK7P50613 346 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 MRPL12P52815 198 aaKnown RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 PSMC6P62333 389 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 ID3Q02535 119 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 TNFAIP2Q03169 654 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 ZRSR1Q15695 479 aaKnown RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 CXCL17Q6UXB2 119 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 SLC30A10Q6XR72 485 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 TBC1D10CQ8IV04 446 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 PCSK9Q8NBP7 692 aaKnown RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 MNS1Q8NEH6 495 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 TET1Q8NFU7 2136 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 PPP1R13LQ8WUF5 828 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 KCNB2Q92953 911 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 RILPL2Q969X0 211 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 NECAB3Q96P71 396 aaPredicted RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 FANCD2OSQ96PS1 177 aa6.36□□□□□ -1.39
CMTM1-207ENST00000465057 MYCBPQ99417 103 aaPredicted RBP6.36□□□□□ -1.39
CMTM1-207ENST00000465057 MPHOSPH6Q99547 160 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms