RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 MFSD5Q6N075 450 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 GLB1L3Q8NCI6 653 aaPredicted RBP5.47□□□□□ -1.53
CLK1-208ENST00000464454 C1orf162Q8NEQ5 155 aaPredicted RBP5.47□□□□□ -1.53
CLK1-208ENST00000464454 Q8TCH9 128 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 TSPEARQ8WU66 669 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 SNX33Q8WV41 574 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 FAXDC2Q96IV6 333 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 SLC13A1Q9BZW2 595 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 CD248Q9HCU0 757 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 MKS1Q9NXB0 559 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 ING3Q9NXR8 418 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 CHPF2Q9P2E5 772 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 NCDNQ9UBB6 729 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 MRFAP1Q9Y605 127 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 RPTORQ8N122 1335 aa5.47□□□□□ -1.53
CLK1-208ENST00000464454 UBE2QL1A1L167 161 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 AKAP10O43572 662 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 TMEM127O75204 238 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 RBP3P10745 1247 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 MSX2P35548 267 aaPredicted RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 RAB27AP51159 221 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 CLUL1Q15846 466 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 ADRM1Q16186 407 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 NFE2Q16621 373 aaPredicted RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 MUM1L1Q5H9M0 696 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 FAM111BQ6SJ93 734 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 PRRT2Q7Z6L0 340 aaPredicted RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 FMNL3Q8IVF7 1028 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 RAVER1Q8IY67 606 aaKnown RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 ANKRD35Q8N283 1001 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 ZNF480Q8WV37 535 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 HOOK2Q96ED9 719 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 C8orf49Q96NF6 230 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 GREM2Q9H772 168 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 AGO3Q9H9G7 860 aaKnown RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 ZNF277Q9NRM2 450 aaPredicted RBP5.46□□□□□ -1.54
CLK1-208ENST00000464454 ST6GALNAC2Q9UJ37 374 aa5.46□□□□□ -1.54
CLK1-208ENST00000464454 CYP27B1O15528 508 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 SNUPNO95149 360 aaKnown RBP5.45□□□□□ -1.54
CLK1-208ENST00000464454 GASTP01350 101 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 AGXTP21549 392 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 CTSSP25774 331 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 FOXL1Q12952 345 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 MALLQ13021 153 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 ACAP1Q15027 740 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 PPP2R5AQ15172 486 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 PNMA8AQ86V59 439 aaPredicted RBP5.45□□□□□ -1.54
CLK1-208ENST00000464454 D2HGDHQ8N465 521 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 MSL3Q8N5Y2 521 aaKnown RBP5.45□□□□□ -1.54
CLK1-208ENST00000464454 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.45□□□□□ -1.54
CLK1-208ENST00000464454 OR5M3Q8NGP4 307 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 EDAQ92838 391 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 TMEM176AQ96HP8 235 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 ADI1Q9BV57 179 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 C1QTNF3Q9BXJ4 246 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 KLC2Q9H0B6 622 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 TLR9Q9NR96 1032 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 JAG2Q9Y219 1238 aa5.45□□□□□ -1.54
CLK1-208ENST00000464454 KLHL33A6NCF5 533 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 MUSKO15146 869 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 ADRB1P08588 477 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 OSMP13725 252 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 RECQLP46063 649 aaPredicted RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 CCT2P78371 535 aaKnown RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 ADAM17P78536 824 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 PIN1Q13526 163 aaPredicted RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 PRKD1Q15139 912 aaPredicted RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 PCBP2Q15366 365 aaKnown RBP eCLIP5.44□□□□□ -1.54
CLK1-208ENST00000464454 FKBP15Q5T1M5 1219 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 ZNF585AQ6P3V2 769 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 PDZD4Q76G19 769 aaPredicted RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 GPR156Q8NFN8 814 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 RIN2Q8WYP3 895 aaPredicted RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 IL17RAQ96F46 866 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 BORCS6Q96GS4 357 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 CAMKK2Q96RR4 588 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 CDC5LQ99459 802 aaKnown RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
CLK1-208ENST00000464454 ZIM2Q9NZV7 527 aa5.44□□□□□ -1.54
CLK1-208ENST00000464454 FAM171A2A8MVW0 826 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 CAPN14A8MX76 684 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 FZD9O00144 591 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 AKR1B10O60218 316 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 IPO13O94829 963 aaKnown RBP5.43□□□□□ -1.54
CLK1-208ENST00000464454 ACO1P21399 889 aaKnown RBP5.43□□□□□ -1.54
CLK1-208ENST00000464454 ECHS1P30084 290 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 CRHR1P34998 444 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 GZMKP49863 264 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 ACAP2Q15057 778 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 MST1LQ2TV78 715 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 CCDC181Q5TID7 509 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 MAMDC4Q6UXC1 1216 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 ABHD15Q6UXT9 468 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 SGMS1Q86VZ5 419 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 CHPFQ8IZ52 775 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 MIEF2Q96C03 454 aa5.43□□□□□ -1.54
CLK1-208ENST00000464454 ZNF512Q96ME7 567 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms