RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ANO3Q9BYT9 981 aa5.96□□□□□ -1.46
ITGB1-208ENST00000464001 EIF2B4Q9UI10 523 aaKnown RBP5.96□□□□□ -1.46
ITGB1-208ENST00000464001 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.96□□□□□ -1.46
ITGB1-208ENST00000464001 LCHNA4D1U4 455 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 PPFIA2O75334 1257 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 ABHD16AO95870 558 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 CFBP00751 764 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 HSP90B1P14625 803 aaKnown RBP5.95□□□□□ -1.46
ITGB1-208ENST00000464001 MANFP55145 182 aaKnown RBP5.95□□□□□ -1.46
ITGB1-208ENST00000464001 FSTL1Q12841 308 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 BROXQ5VW32 411 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 DNAJC10Q8IXB1 793 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 OR52N2Q8NGI0 321 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 PROKR1Q8TCW9 393 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 NDC1Q9BTX1 674 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 PRSS50Q9UI38 385 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 TMPRSS11EQ9UL52 423 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 PPP2R3BQ9Y5P8 575 aa5.95□□□□□ -1.46
ITGB1-208ENST00000464001 MRPL42Q9Y6G3 142 aaKnown RBP5.95□□□□□ -1.46
ITGB1-208ENST00000464001 PRR5-ARHGAP8B1AHC4 643 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 KDM1AO60341 852 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 RHOBTB3O94955 611 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 LTA4HP09960 611 aaKnown RBP5.94□□□□□ -1.46
ITGB1-208ENST00000464001 NR4A1P22736 598 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 UBE3CQ15386 1083 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 DDB1Q16531 1140 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 TIGD2Q4W5G0 525 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 KCNV1Q6PIU1 500 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 PCSK4Q6UW60 755 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 LRRC55Q6ZSA7 311 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 RASSF3Q86WH2 238 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 MSL3Q8N5Y2 521 aaKnown RBP5.94□□□□□ -1.46
ITGB1-208ENST00000464001 OR14C36Q8NHC7 312 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 SLC5A5Q92911 643 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 KCNH6Q9H252 994 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 MS4A5Q9H3V2 200 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 EMC7Q9NPA0 242 aa5.94□□□□□ -1.46
ITGB1-208ENST00000464001 NOC2LQ9Y3T9 749 aaKnown RBP5.94□□□□□ -1.46
ITGB1-208ENST00000464001 GCP02774 474 aa5.93□□□□□ -1.46
ITGB1-208ENST00000464001 LAG3P18627 525 aa5.93□□□□□ -1.46
ITGB1-208ENST00000464001 NANOS3P60323 173 aaKnown RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 MEF2AQ02078 507 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 APBA1Q02410 837 aa5.93□□□□□ -1.46
ITGB1-208ENST00000464001 PLEKHG4Q58EX7 1191 aa5.93□□□□□ -1.46
ITGB1-208ENST00000464001 KIAA0907Q7Z7F0 614 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 LEO1Q8WVC0 666 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 DCLRE1CQ96SD1 692 aaKnown RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 CDC5LQ99459 802 aaKnown RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 LSM14BQ9BX40 385 aaKnown RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 SLC46A2Q9BY10 475 aa5.93□□□□□ -1.46
ITGB1-208ENST00000464001 CPEB1Q9BZB8 566 aaKnown RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 EVLQ9UI08 416 aaPredicted RBP5.93□□□□□ -1.46
ITGB1-208ENST00000464001 GSG1L2A8MUP6 293 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 PRAMEF4O60810 478 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 ATP13A4Q4VNC1 1196 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 C19orf54Q5BKX5 351 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 MBNL2Q5VZF2 373 aaKnown RBP5.92□□□□□ -1.46
ITGB1-208ENST00000464001 CCDC62Q6P9F0 684 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 JAZF1Q86VZ6 243 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 SLC41A1Q8IVJ1 513 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 PAWRQ96IZ0 340 aaKnown RBP5.92□□□□□ -1.46
ITGB1-208ENST00000464001 CRAMP1Q96RY5 1269 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 MLST8Q9BVC4 326 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 MAPRE3Q9UPY8 281 aa5.92□□□□□ -1.46
ITGB1-208ENST00000464001 AHRRA9YTQ3 701 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 CLEC2LP0C7M8 214 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 MYCLP1P12525 358 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-208ENST00000464001 APOBEC3AP31941 199 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-208ENST00000464001 TAF7LQ5H9L4 462 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 GPRIN1Q7Z2K8 1008 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 ZNF575Q86XF7 245 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 XYLT1Q86Y38 959 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 LYSMD2Q8IV50 215 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 USP7Q93009 1102 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 MYEOVQ96EZ4 313 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 SPON1Q9HCB6 807 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 TRPM5Q9NZQ8 1165 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 PACSIN3Q9UKS6 424 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 HS3ST4Q9Y661 456 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 CDY2AQ9Y6F7 541 aa5.91□□□□□ -1.46
ITGB1-208ENST00000464001 A0A087X0B3 334 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 B5MCH6 92 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 RNASET2O00584 256 aaKnown RBP5.9□□□□□ -1.46
ITGB1-208ENST00000464001 PDE8AO60658 829 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 TRIM25Q14258 630 aaKnown RBP5.9□□□□□ -1.46
ITGB1-208ENST00000464001 DRICH1Q6PGQ1 229 aaPredicted RBP5.9□□□□□ -1.46
ITGB1-208ENST00000464001 PDZD4Q76G19 769 aaPredicted RBP5.9□□□□□ -1.46
ITGB1-208ENST00000464001 GDF7Q7Z4P5 450 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 VRK3Q8IV63 474 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 SNX33Q8WV41 574 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 KRTAP9-8Q9BYQ0 159 aa5.9□□□□□ -1.46
ITGB1-208ENST00000464001 ZNF768Q9H5H4 540 aaKnown RBP5.9□□□□□ -1.46
ITGB1-208ENST00000464001 COL4A3Q01955 1670 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.89□□□□□ -1.47
ITGB1-208ENST00000464001 GAGE12BA1L429 117 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 GAGE12HA6NDE8 117 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 DIRC3C9JPN6 131 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 B3GALT2O43825 422 aa5.89□□□□□ -1.47
ITGB1-208ENST00000464001 GASTP01350 101 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms